This family has 112 members: 25 Arabidopsis thaliana, 7 Caenorhabditis elegans, 19 Danio rerio, 2 Dictyostelium discoideum, 7 Drosophila melanogaster, 11 Gallus gallus, 12 Homo sapiens, 11 Mus musculus, 11 Rattus norvegicus, 4 Saccharomyces cerevisiae, 3 Schizosaccharomyces pombe.
Interactive Java Applets: Notung Tree Analysis · Jalview Alignment
| Organism | Protein (Synonyms) | Description | AmiGO |
|---|---|---|---|
| A. thaliana | TAIR:locus:2116322 (F10M23.340 · ATRBP45C · AT4G27000 · F10M23_340) · NCBI:NP_567764.1 |  | |
| A. thaliana | NCBI:NP_172630.1 · TAIR:locus:2027372 (F25C20_21 · AT1G11650 · RBP45B · F25C20.21 · ATRBP45B) | | |
| A. thaliana | NCBI:NP_974937.1 · TAIR:locus:2173967 (MTE17.27 · MTE17_27 · AT5G55550) | | |
| A. thaliana | NCBI:NP_194208.1 · TAIR:locus:2122009 (F6I7.11 · AT4G24770 · STEP1 · ATRBP33 · CP31 · RBP31 · ATRBP31) | ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD · 31-KDA RNA BINDING PROTEIN | |
| A. thaliana | NCBI:NP_175181.1 · TAIR:locus:2015398 (AT1G47500 · F16N3_23 · F16N3.23 · ATRBP47C') | RNA-binding protein 47C' | |
| A. thaliana | NCBI:NP_188544.1 · TAIR:locus:2094098 (ATRBP47B · MVI11.3 · AT3G19130) | RNA-binding protein 47B | |
| A. thaliana | NCBI:NP_175383.1 · TAIR:locus:2012211 (AT1G49600 · ATRBP47A · F14J22_16 · F14J22.16) | Arabidopsis thaliana RNA-binding protein 47a | |
| A. thaliana | NCBI:NP_176143.1 · TAIR:locus:2037633 (RBP1 · AT1G58470 · F9K23.11 · ATRBP1 · F9K23_11) | RNA-BINDING PROTEIN 1 · ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 1 | |
| A. thaliana | NCBI:NP_175180.1 · TAIR:locus:2015403 (ATRBP47C · F16N3.24 · AT1G47490 · F16N3_24) | ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C | |
| A. thaliana | NCBI:NP_190914.1 · TAIR:locus:2084061 (CP29 · AT3G53460 · F4P12.160) | | |
| A. thaliana | NCBI:NP_190806.1 · TAIR:locus:2079874 (AT3G52380 · CP33 · T25B15.18 · PDE322) | PIGMENT DEFECTIVE 322 | |
| A. thaliana | NCBI:NP_851149.1 · TAIR:locus:2169068 (MNJ7.21 · MNJ7_21 · AT5G47620) | | |
| A. thaliana | NCBI:NP_849806.1 · TAIR:locus:2014340 (F15I1_16 · UBP1A · F15I1.16 · AT1G54080) | OLIGOURIDYLATE-BINDING PROTEIN 1A | |
| A. thaliana | NCBI:NP_850539.1 · TAIR:locus:2077392 (F17A17.15 · AT3G07810) | | |
| A. thaliana | NCBI:NP_568815.1 · TAIR:locus:2160210 (AT5G54900 · MBG8_17 · MBG8.17 · ATRBP45A) | RNA-binding protein 45A | |
| A. thaliana | NCBI:NP_197436.1 · TAIR:locus:2150215 (AT5G19350 · F7K24.100 · F7K24_100) | | |
| A. thaliana | NCBI:NP_181259.1 · TAIR:locus:2049721 (AT2G37220 · F3G5_1 · F3G5.1) | | |
| A. thaliana | NCBI:NP_568220.1 · TAIR:locus:2178198 (MYH9.9 · MYH9_9 · AT5G09880) | | |
| A. thaliana | NCBI:NP_188026.1 · TAIR:locus:2087457 (MAG2.1 · AT3G14100) | | |
| A. thaliana | NCBI:NP_564018.1 · TAIR:locus:2018794 (AT1G17370 · UBP1B · F28G4.17) | oligouridylate binding protein 1B | |
| A. thaliana | NCBI:NP_173208.1 · TAIR:locus:2007903 (AT1G17640 · F11A6.17) | | |
| A. thaliana | NCBI:NP_567753.1 · TAIR:locus:2133862 (AT4G26650 · T15N24.100 · T15N24_100) | | |
| A. thaliana | NCBI:NP_683559.2 · TAIR:locus:504955752 (AT3G13224) | | |
| A. thaliana | NCBI:NP_565399.1 · TAIR:locus:2039400 (F12A24.12 · F12A24_12 · AT2G16940) | | |
| A. thaliana | NCBI:NP_199836.1 · TAIR:locus:2157702 (K6A12.11 · AT5G50250 · K6A12_11) | | |
| C. elegans | WB:WBGene00003423 (msi-1 · R10E9.1) · UniProtKB:Q21911 | | |
| C. elegans | WB:WBGene00022235 (Y73B6BL.6 · sqd-1) · UniProtKB:Q4W5P0 | | |
| C. elegans | WB:WBGene00019249 (H28G03.1) · UniProtKB:Q8WSM6 | | |
| C. elegans | WB:WBGene00015943 (C18A3.5) · UniProtKB:Q95QV8 | | |
| C. elegans | WB:WBGene00021921 (Y55F3AM.3) · UniProtKB:Q9N368 | | |
| C. elegans | WB:WBGene00004389 (rnp-6 · Y47G6A.20) · UniProtKB:Q9N3S4 | | |
| C. elegans | WB:WBGene00012904 (Y46G5A.13) · UniProtKB:Q9U2F5 | | |
| D. rerio | ENSEMBL:ENSDARP00000041633 | ||
| D. rerio | ENSEMBL:ENSDARP00000088198 | ||
| D. rerio | UniProtKB:Q6IQE0 · ZFIN:ZDB-GENE-040625-116 (puf60b) | poly-U binding splicing factor b | |
| D. rerio | ENSEMBL:ENSDARG00000032175 · UniProtKB:A4IGG2 | ||
| D. rerio | UniProtKB:A4QP67 · ZFIN:ZDB-GENE-070424-97 (hnrnpd) | heterogeneous nuclear ribonucleoprotein D | |
| D. rerio | UniProtKB:Q58ER0 · ZFIN:ZDB-GENE-050327-97 (rbm39b) | RNA binding motif protein 39b | |
| D. rerio | ZFIN:ZDB-GENE-040426-2516 (zgc:77052) · UniProtKB:Q6NYA1 | | |
| D. rerio | ZFIN:ZDB-GENE-030131-2249 (zgc:77366) · UniProtKB:Q6NYB0 | | |
| D. rerio | UniProtKB:Q6NYW8 · ZFIN:ZDB-GENE-030131-6154 (hnrnpa0) | heterogeneous nuclear ribonucleoprotein A0 | |
| D. rerio | UniProtKB:Q7SXN2 · ZFIN:ZDB-GENE-040426-2717 (hnrpdl) | heterogeneous nuclear ribonucleoprotein D-like | |
| D. rerio | UniProtKB:Q7SXQ1 · ZFIN:ZDB-GENE-040426-1547 (tial1) | TIA1 cytotoxic granule-associated RNA binding protein-like 1 | |
| D. rerio | UniProtKB:Q7SXT6 · ZFIN:ZDB-GENE-040426-1268 (msi2b) | musashi homolog 2b (Drosophila) | |
| D. rerio | UniProtKB:Q7ZU48 · ZFIN:ZDB-GENE-030131-618 (hnrnpa0l) | heterogeneous nuclear ribonucleoprotein A0, like | |
| D. rerio | UniProtKB:Q7ZUJ9 · ZFIN:ZDB-GENE-030131-185 (hnrnpab) | heterogeneous nuclear ribonucleoprotein A/B | |
| D. rerio | UniProtKB:Q7ZVY0 · ZFIN:ZDB-GENE-030131-1506 (tia1) | cytotoxic granule-associated RNA binding protein 1 | |
| D. rerio | UniProtKB:Q803H1 · ZFIN:ZDB-GENE-040426-2852 (rbm39a) | RNA binding motif protein 39a | |
| D. rerio | UniProtKB:A8E5B6 · ZFIN:ZDB-GENE-070212-1 (dazap1) | DAZ associated protein 1 | |
| D. rerio | UniProtKB:Q7ZVM6 · ZFIN:ZDB-GENE-030131-2167 (tia1l) | cytotoxic granule-associated RNA binding protein 1, like | |
| D. rerio | UniProtKB:Q7ZW10 · ZFIN:ZDB-GENE-030826-25 (msi2a) | musashi homolog 2a (Drosophila) | |
| D. discoideum | UniProtKB:Q54QQ7 · dictyBase:DDB_G0283687 (DDB_G0283687) | RNA-binding region RNP-1 domain-containing protein, RNA recognition motif-containing protein RRM, putative RNA splicing factor | |
| D. discoideum | UniProtKB:Q75K16 · dictyBase:DDB_G0275459 (DDB_G0275459) | RNA-binding region RNP-1 domain-containing protein, RNA recognition motif-containing protein RRM | |
| D. melanogaster | UniProtKB:Q8T6B9 · FB:FBgn0028577 (CG12085 · pUbsf · DPUF68 · Fir · half-pint · Hfp · pUf68 · anon-WO0118547.408 · hfp · HFP · dFIR · Half-pint · PUF60 · Puf60) | half pint · poly U binding factor 68kD · polyU binding splicing factor | |
| D. melanogaster | UniProtKB:P48809 · FB:FBgn0004838 (10280 · Hrb27c · Rbp7 · rrm7 · l(2)02647 · Ov5 · hnRNP27C · l(2)10280 · hrb27c · hrb27C · linha · Hrp48 · p50 · Hrb27C · l(2)2647 · Hrb27-C · hnRNP48 · hrp48 · RRM7 · Hrb48 · CG10377) | Heterogeneous nuclear ribonucleoprotein at 27C · RNA-binding protein 7 | |
| D. melanogaster | UniProtKB:Q08473 · FB:FBgn0086897 (Sqd · l(3)EP3631 · CG17791 · squid · sqd · Squid · l(3)j8E7 · l(3)j6E3 · hrp40 · RRM3 · Hrp40 · Hrb87Fb · Rbp3 · Hrb87 · fs(3)00048 · l(3)j4B4 · HRP40 · rrm3 · CG16901 · heterogeneous-nuclear-ribonucleoprotein-87Fb) | RNA-binding protein 3 · hnRNP 1 · lethal (3) j4B4 | |
| D. melanogaster | UniProtKB:Q8IMX4 · FB:FBgn0005649 (RRM12 · CG5422 · Rbp12 · rrm12 · DmTIAR · Rox8 · TIAR · ROX8 · rox8) | RNA-binding protein 12 | |
| D. melanogaster | FB:FBgn0038345 (CG5213 · cg5213) · UniProtKB:Q9VF55 | | |
| D. melanogaster | FB:FBgn0031883 (CC1.3 · CAPER · CG11266 · cg11266 · HCC1) · UniProtKB:Q9VM49 | | |
| D. melanogaster | FB:FBgn0052169 · UniProtKB:Q9VVE5 | ||
| G. gallus | NCBI:XP_415912 · ENTREZ:417667 | ||
| G. gallus | NCBI:XP_414620 · ENTREZ:416302 | ||
| G. gallus | NCBI:XP_425690 · ENTREZ:428133 | ||
| G. gallus | NCBI:XP_415271 · ENTREZ:416979 | ||
| G. gallus | ENTREZ:422601 · UniProtKB:Q5ZI72 (Q5ZI72 · HNRDL_CHICK · IPI00591109 · RCJMB04_29l7 · HNRPDL) | Heterogeneous nuclear ribonucleoprotein D-like | |
| G. gallus | UniProtKB:Q5F3W7 (Q5F3W7 · IPI00596858 · RCJMB04_5e8) · ENTREZ:426402 | | |
| G. gallus | UniProtKB:Q5ZIH1 (IPI00597667 · Q5ZIH1 · RCJMB04_26e18) · ENTREZ:422602 | | |
| G. gallus | UniProtKB:Q5ZM92 (IPI00577519 · Q5ZM92 · RCJMB04_2n4) · ENTREZ:427266 | | |
| G. gallus | UniProtKB:Q800W3 (IPI00575679 · Q800W3) · ENTREZ:374274 | | |
| G. gallus | UniProtKB:Q800W4 (Q800W4 · IPI00577572) · ENTREZ:771327 | | |
| G. gallus | UniProtKB:Q90602 (IPI00603451 · Q90602) · ENTREZ:396268 | | |
| H. sapiens | ENSEMBL:ENSG00000071626 · UniProtKB:Q96EP5 (IPI00335930 · IPI00165230 · Q96EP5 · DAZAP1 · DAZP1_HUMAN) | DAZ-associated protein 1 | |
| H. sapiens | ENSEMBL:ENSG00000152795 · UniProtKB:O14979 (HNRDL_HUMAN · IPI00045498 · JKTBP · O14979 · IPI00845282 · IPI00011274 · HNRPDL) | Heterogeneous nuclear ribonucleoprotein D-like | |
| H. sapiens | ENSEMBL:ENSG00000138668 · UniProtKB:Q14103 (IPI00220685 · IPI00028888 · HNRPD · IPI00220684 · HNRPD_HUMAN · IPI00220683 · HNRNPD · Q14103 · AUF1) | Heterogeneous nuclear ribonucleoprotein D0 | |
| H. sapiens | ENSEMBL:ENSG00000135097 · UniProtKB:O43347 (IPI00001007 · MSI1H_HUMAN · O43347 · MSI1) | RNA-binding protein Musashi homolog 1 | |
| H. sapiens | ENSEMBL:ENSG00000153944 · UniProtKB:Q96DH6 (IPI00455161 · IPI00073713 · MSI2H_HUMAN · MSI2 · Q96DH6 · IPI00167806) | RNA-binding protein Musashi homolog 2 | |
| H. sapiens | ENSEMBL:ENSG00000179950 · UniProtKB:Q9UHX1 (SIAHBP1 · FIR · IPI00788826 · IPI00069750 · Q9UHX1 · ROBPI · IPI00100716 · PUF60_HUMAN · IPI00856076 · PUF60 · IPI00797595 · IPI00855912) | Poly(U)-binding-splicing factor PUF60 | |
| H. sapiens | ENSEMBL:ENSG00000100461 · UniProtKB:Q86U06 (IPI00168431 · PP239 · Q86U06 · IPI00386141 · RBM23_HUMAN · IPI00376962 · RBM23 · RNPC4 · IPI00376960 · IPI00376963) | Probable RNA-binding protein 23 | |
| H. sapiens | ENSEMBL:ENSG00000131051 · UniProtKB:Q14498 (RBM39_HUMAN · RNPC2 · IPI00163505 · IPI00215801 · RBM39 · HCC1 · Q14498) | RNA-binding protein 39 | |
| H. sapiens | ENSEMBL:ENSG00000177733 · UniProtKB:Q13151 (Q13151 · IPI00011913 · HNRNPA0 · HNRPA0 · ROA0_HUMAN) | Heterogeneous nuclear ribonucleoprotein A0 | |
| H. sapiens | ENSEMBL:ENSG00000197451 · UniProtKB:Q99729 (Q99729 · IPI00334587 · IPI00106509 · HNRNPAB · IPI00329355 · ROAA_HUMAN · IPI00334713 · HNRPAB · ABBP1) | Heterogeneous nuclear ribonucleoprotein A/B | |
| H. sapiens | ENSEMBL:ENSG00000116001 · UniProtKB:P31483 (IPI00291398 · TIA1 · P31483 · TIA1_HUMAN · IPI00333996) | Nucleolysin TIA-1 isoform p40 | |
| H. sapiens | ENSEMBL:ENSG00000151923 · UniProtKB:Q01085 (IPI00005615 · TIAL1 · Q01085 · TIAR_HUMAN) | Nucleolysin TIAR | |
| M. musculus | UniProtKB:Q9JII5 · MGI:MGI:1917498 (Dazap1 · mPrrp) | DAZ associated protein 1 | |
| M. musculus | UniProtKB:Q9Z130 · MGI:MGI:1355299 (hnRNP-DL · D5Wsu145e · JKTBP · Hnrpdl · D5Ertd650e) | heterogeneous nuclear ribonucleoprotein D-like | |
| M. musculus | UniProtKB:Q60668 · MGI:MGI:101947 (Auf1 · Hnrpd · Hnrnpd) | heterogeneous nuclear ribonucleoprotein D | |
| M. musculus | UniProtKB:Q61474 · MGI:MGI:107376 (Musahi1 · Msi1h · m-Msi-1 · Msi1) | Musashi homolog 1(Drosophila) | |
| M. musculus | UniProtKB:Q920Q6 · MGI:MGI:1923876 (Musashi2 · msi2h · Msi2) | Musashi homolog 2 (Drosophila) | |
| M. musculus | UniProtKB:Q3UEB3 · MGI:MGI:1915209 (Puf60) | poly-U binding splicing factor 60 | |
| M. musculus | UniProtKB:Q8VH51 · MGI:MGI:2157953 (Rnpc2 · Rbm39 · caper) | RNA binding motif protein 39 | |
| M. musculus | UniProtKB:Q99020 · MGI:MGI:1330294 (Hnrnpab · Hnrpab · Cgbfa · CBF-A) | heterogeneous nuclear ribonucleoprotein A/B | |
| M. musculus | UniProtKB:P52912 · MGI:MGI:107914 (mTIA-1 · Tia1) | cytotoxic granule-associated RNA binding protein 1 | |
| M. musculus | UniProtKB:P70318 · MGI:MGI:107913 (mTIAR · Tial1) | Tia1 cytotoxic granule-associated RNA binding protein-like 1 | |
| M. musculus | MGI:MGI:1924384 · UniProtKB:Q9CX86 | ||
| R. norvegicus | NCBI:XP_001081205 · RGD:1560397 (Msi2) | Musashi homolog 2 (Drosophila) | |
| R. norvegicus | UniProtKB:Q3SWU3 · RGD:1309950 (Hnrpdl) | heterogeneous nuclear ribonucleoprotein D-like | |
| R. norvegicus | UniProtKB:P17132 · RGD:1309982 (Hnrnpc) | heterogeneous nuclear ribonucleoprotein C (C1/C2) | |
| R. norvegicus | RGD:620365 (Hnrpd) · UniProtKB:Q9JJ54 (HNRPD_RAT · IPI00231383 · Auf1 · Q9JJ54 · Hnrpd · IPI00231385 · IPI00231384 · IPI00201032 · Hnrnpd) | heterogeneous nuclear ribonucleoprotein D · Heterogeneous nuclear ribonucleoprotein D0 | |
| R. norvegicus | UniProtKB:Q8K3P4 · RGD:628778 (Msi1) | Musashi homolog 1(Drosophila) | |
| R. norvegicus | RGD:621674 (Siahbp1) · UniProtKB:Q9WV25 (PUF60_RAT · Siahbp1 · Q9WV25 · IPI00204315 · IPI00780677 · Puf60) | siah binding protein 1; FBP interacting repressor; pyrimidine tract binding splicing factor; Ro ribonucleoprotein-binding protein 1 · Poly(U)-binding-splicing factor PUF60 | |
| R. norvegicus | UniProtKB:Q4KLZ3 · RGD:1305280 (Dazap1) | DAZ associated protein 1 | |
| R. norvegicus | UniProtKB:Q5BJN3 · RGD:1595845 (Tial1) | Tia1 cytotoxic granule-associated RNA binding protein-like 1 | |
| R. norvegicus | UniProtKB:Q5BJP4 · RGD:1310071 (Rbm39) | RNA binding motif protein 39 | |
| R. norvegicus | UniProtKB:Q5PQR7 · RGD:1305742 (Tia1) | TIA1 cytotoxic granule-associated RNA binding protein | |
| R. norvegicus | UniProtKB:Q9QX81 (IPI00212724 · Hnrpab · Q9QX81) · RGD:69255 (Hnrnpab) | heterogeneous nuclear ribonucleoprotein A/B | |
| S. cerevisiae | UniProtKB:Q00539 · SGD:S000001128 (NAM8 · MUD15 · MRE2 · YHR086W) | RNA binding protein, component of the U1 snRNP protein | |
| S. cerevisiae | UniProtKB:P32831 · SGD:S000000416 (RBP1 · NGR1 · YBR212W) | RNA binding protein that negatively regulates growth rate | |
| S. cerevisiae | UniProtKB:P53883 · SGD:S000005119 (YNL175C · NOP13) | Nucleolar protein found in preribosomal complexes | |
| S. cerevisiae | UniProtKB:P32588 · SGD:S000004961 (YNL016W · RNP1 · PUB1) | Poly (A)+ RNA-binding protein, abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs | |
| S. pombe | UniProtKB:Q09100 · GeneDB_Spombe:SPAC3G6.04 (SPAC3G6.04 · rnp24) | RNA-binding protein Rnp24 | |
| S. pombe | UniProtKB:O13845 · GeneDB_Spombe:SPAC19G12.07c (SPAC19G12.07c · rsd1) | RNA-binding protein Rsd1 | |
| S. pombe | UniProtKB:O60176 · GeneDB_Spombe:SPBC23E6.01c (SPBPJ758.01 · SPBC23E6.01c) | RNA-binding protein, rrm type | |
No functional conservation results.
| Description | Suffix |
|---|---|
| Sequences in this family | .fasta |
| mafft aligned Fasta file | .afasta |
| phyml newick file | .newick |
| Notung rooted & rearranged newick file | .newick.rooting.0.rearrange.0 |
| Notung Homolog Table | .newick.rooting.0.rearrange.0.homologs.csv |