P-POD: Princeton Protein Orthology Database: GO3/Para4057

This family has 10 members: 1 Caenorhabditis elegans, 1 Danio rerio, 1 Drosophila melanogaster, 1 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Para4057
10 members.
OrganismProtein (Synonyms)DescriptionAmiGO
C. elegansUniProtKB:P91904 · WB:WBGene00001328 (K08C7.3 · epi-1)⌘
D. rerioUniProtKB:Q2Q1W5 · ZFIN:ZDB-GENE-030131-9823 (lama5)laminin, alpha 5⌘
D. melanogasterUniProtKB:Q00174 · FB:FBgn0002526 (lanA · LanA · laminin · alpha3/5 · Lam · CG10236 · LM-A/alpha1 · Lan · Laminin · hdln · CT28769 · LamA · lamA · headline · LamininA · Lam-A)Laminin A · laminin alpha-chain · alpha3,5 laminin · laminin A · laminin alpha · Laminin alpha3,5 · laminin alpha3,5 · laminin alpha3/5⌘
G. gallusNCBI:XP_426078 · ENTREZ:428524
H. sapiensENSEMBL:ENSG00000053747 · UniProtKB:Q16787 (IPI00790353 · LAMA3 · IPI00790908 · LAMA3_HUMAN · LAMNA · Q16787)Laminin subunit alpha-3⌘
H. sapiensENSEMBL:ENSG00000130702 · UniProtKB:O15230 (KIAA0533 · LAMA5 · KIAA1907 · LAMA5_HUMAN · O15230 · IPI00783665)Laminin subunit alpha-5⌘
M. musculusUniProtKB:Q61789 · MGI:MGI:99909 (Lama3 · [a]3B)nicein, 150kDa · laminin, alpha 3⌘
M. musculusUniProtKB:Q61001 · MGI:MGI:105382 (Lama5)laminin, alpha 5⌘
R. norvegicusNCBI:XP_001061082 · RGD:1595304
R. norvegicusUniProtKB:P70570 (Lama3 · IPI00189741 · P70570) · RGD:628776 (Lama3)laminin, alpha 3⌘⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
OMIM (2)
ENSEMBL:ENSG00000053747 · UniProtKB:Q16787#226700 EPIDERMOLYSIS BULLOSA, JUNCTIONAL, HERLITZ TYPE;;EPIDERMOLYSIS BULLOSA JUNCTIONALIS, HERLITZ TYPE;;JEB-HERLITZ TYPE;;EPIDERMOLYSIS BULLOSA, JUNCTIONAL, HERLITZ-PEARSON TYPE;;HERLITZ-PEARSON-TYPE EPIDERMOLYSIS BULLOSA;;EPIDERMOLYSIS BULLOSA LETALIS
ENSEMBL:ENSG00000053747 · UniProtKB:Q16787#245660 LARYNGOONYCHOCUTANEOUS SYNDROME; LOCS;;LOGIC SYNDROME
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu