P-POD: Princeton Protein Orthology Database: GO3/Para400

This family has 23 members: 4 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Escherichia coli, 1 Gallus gallus, 1 Homo sapiens, 2 Mus musculus, 5 Rattus norvegicus, 2 Saccharomyces cerevisiae, 3 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Para400
23 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2146273 (F20L16_100 · F20L16.100 · AT5G18380) · NCBI:NP_197339.1⌘
A. thalianaNCBI:NP_187073.1 · TAIR:locus:2103035 (T6K12_15 · T6K12.15 · AT3G04230)⌘
A. thalianaNCBI:NP_178826.1 · TAIR:locus:2052120 (AT2G09990 · F7B19_13 · F7B19.13)⌘
A. thalianaNCBI:NP_177635.1 · TAIR:locus:2037222 (AT1G74970 · TWN3 · F25A4.6 · RPS9 · F25A4_6)RIBOSOMAL PROTEIN S9⌘
C. elegansWB:WBGene00004485 (T01C3.6 · rps-16) · UniProtKB:Q22054⌘
D. rerioUniProtKB:Q1LWH1 · ZFIN:ZDB-GENE-050506-107 (rps16)ribosomal protein S16⌘
D. discoideumUniProtKB:Q54Q51 · dictyBase:DDB_G0284093 (rps16)40S ribosomal protein S16⌘
D. melanogasterUniProtKB:Q9W237 · FB:FBgn0034743 (RpS16 · CG4046 · bs32d05.y1)Ribosomal protein S16⌘
E. coliUniProtKB:P0A7X3 · ECOLI:EG10908-MONOMER (b3230 · ECK3219 · rpsI · RpsI)30S ribosomal subunit protein S9⌘
G. gallusNCBI:XP_416113 · ENTREZ:417871
H. sapiensENSEMBL:ENSG00000105193 · UniProtKB:P62249 (RPS16 · IPI00221092 · P62249 · RS16_HUMAN)40S ribosomal protein S16⌘
M. musculusNCBI:NP_001103687 · MGI:MGI:3704259 (ENSMUSG00000060419)predicted gene, ENSMUSG00000060419⌘
M. musculusUniProtKB:P14131 · MGI:MGI:98118 (Rps16)ribosomal protein S16⌘
R. norvegicusNCBI:XP_233593 · RGD:1561484 (RGD1561484)similar to ribosomal protein S16⌘
R. norvegicusNCBI:XP_001077718 · RGD:1593309 (LOC691983)similar to 40S ribosomal protein S16⌘
R. norvegicusNCBI:XP_345347 · RGD:1561137 (RGD1561137)similar to 40S ribosomal protein S16⌘
R. norvegicusNCBI:XP_236683 · RGD:1559743 (RGD1559743)similar to 40S ribosomal protein S16⌘
R. norvegicusUniProtKB:P62250 · RGD:621031 (Rps16)ribosomal protein S16⌘
S. cerevisiaeUniProtKB:P40213 · SGD:S000004751 (YMR143W · RPS16A)Protein component of the small (40S) ribosomal subunit⌘
S. cerevisiaeUniProtKB:P40213 · SGD:S000002241 (RPS16B · YDL083C)Protein component of the small (40S) ribosomal subunit⌘
S. pombeUniProtKB:O60144 · GeneDB_Spombe:SPAC664.04c (rps16 · rps16-2 · SPAC664.04c · rps1602)40S ribosomal protein S16⌘
S. pombeUniProtKB:O60144 · GeneDB_Spombe:SPBC18H10.14 (rps1601 · SPBC18H10.14 · rps16-1)40S ribosomal protein S16⌘
S. pombeUniProtKB:O14006 · GeneDB_Spombe:SPAC29A4.03c (SPAC29A4.03c)mitochondrial ribosomal protein subunit S9⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu