This family has 10 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.
Interactive Java Applets: Notung Tree Analysis · Jalview Alignment
| Organism | Protein (Synonyms) | Description | AmiGO |
|---|---|---|---|
| A. thaliana | TAIR:locus:2075351 (F12M12.180 · AT3G46210) · NCBI:NP_190207.1 |  | |
| C. elegans | WB:WBGene00000798 (crn-5 · C14A4.5) · UniProtKB:Q17952 | | |
| D. rerio | UniProtKB:Q1LVM3 · ZFIN:ZDB-GENE-060503-675 (exosc5) | exosome component 5 | |
| D. discoideum | dictyBase:DDB_G0284053 (DDB_G0284053) · UniProtKB:Q54Q83 | | |
| D. melanogaster | UniProtKB:Q95TW1 · FB:FBgn0037815 (dRrp46 · CG4043 · Rrp46) | | |
| H. sapiens | ENSEMBL:ENSG00000077348 · UniProtKB:Q9NQT4 (IPI00015955 · RRP46 · CML28 · EXOSC5 · EXOS5_HUMAN · Q9NQT4) | Exosome complex exonuclease RRP46 | |
| M. musculus | UniProtKB:Q9CRA8 · MGI:MGI:107889 (D7Wsu180e · Exosc5) | exosome component 5 | |
| R. norvegicus | NCBI:XP_218343 · RGD:1307861 (Exosc5) | exosome component 5 | |
| S. cerevisiae | UniProtKB:P53256 · SGD:S000003327 (RRP46 · YGR095C) | Exosome non-catalytic core component | |
| S. pombe | UniProtKB:O42894 · GeneDB_Spombe:SPBC115.01c (rrp46 · SPBC115.01c) | exosome subunit Rrp46 | |
No functional conservation results.
| Description | Suffix |
|---|---|
| Sequences in this family | .fasta |
| mafft aligned Fasta file | .afasta |
| phyml newick file | .newick |
| Notung rooted & rearranged newick file | .newick.rooting.0.rearrange.0 |
| Notung Homolog Table | .newick.rooting.0.rearrange.0.homologs.csv |
| SGD Disease Papers (1) | |
|---|---|
| UniProtKB:P53256 · SGD:S000003327 |  10465791 Allmang C, et al. (1999) The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases. Genes Dev 13(16):2148-58 |