P-POD: Princeton Protein Orthology Database: GO3/Para355

This family has 13 members: 2 Arabidopsis thaliana, 2 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Para355
13 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2038761 (AT2G01330 · F10A8_21 · F10A8.21) · NCBI:NP_178242.2⌘
A. thalianaNCBI:NP_188434.2 · TAIR:locus:2092742 (MRC8.5 · AT3G18060)⌘
C. elegansWB:WBGene00006810 (C04F6.4 · unc-78) · UniProtKB:Q11176⌘
C. elegansWB:WBGene00010685 · UniProtKB:O17939
D. rerioZFIN:ZDB-GENE-040426-804 · UniProtKB:Q7ZVQ3
D. discoideumUniProtKB:P54686 · dictyBase:DDB_G0278733 (WRP2 · rcdA · AIP1 · veg150 · wdpA · DAip1)WD40 repeat-containing protein⌘
D. melanogasterFB:FBgn0036357 · UniProtKB:Q9VU68
G. gallusENTREZ:422842 · UniProtKB:O93277 (WDR1 · IPI00581678 · WDR1_CHICK · O93277)WD repeat-containing protein 1⌘
H. sapiensENSEMBL:ENSG00000071127 · UniProtKB:O75083 (IPI00216256 · WDR1 · WDR1_HUMAN · IPI00903292 · O75083 · IPI00746165)WD repeat-containing protein 1⌘
M. musculusUniProtKB:O88342 · MGI:MGI:1337100 (Aip1 · D5Wsu185e · Wdr1 · rede)WD repeat domain 1⌘
R. norvegicusUniProtKB:Q5RKI0 · RGD:1305789 (Wdr1)WD repeat domain 1⌘
S. cerevisiaeUniProtKB:P46680 · SGD:S000004698 (YMR092C · AIP1)Actin cortical patch component, interacts with the actin depolymerizing factor cofilin⌘
S. pombeUniProtKB:O14301 · GeneDB_Spombe:SPAC9G1.05 (SPAC9G1.05)actin cortical patch component Aip1 · actin cortical patch component Aip1 (predicted)⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu