P-POD: Princeton Protein Orthology Database: GO3/Para3388

This family has 30 members: 2 Caenorhabditis elegans, 7 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 4 Gallus gallus, 4 Homo sapiens, 4 Mus musculus, 4 Rattus norvegicus, 2 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Para3388
30 members.
OrganismProtein (Synonyms)DescriptionAmiGO
C. elegansUniProtKB:O02495 · WB:WBGene00004897 (T10H9.4 · snb-1)⌘
C. elegansWB:WBGene00004898 (F23H12.1 · snb-2) · UniProtKB:Q19767⌘
D. rerioENSEMBL:ENSDARG00000070693 · UniProtKB:Q6DGI1
D. rerioUniProtKB:Q6DGI1 · ENSEMBL:ENSDARG00000023492
D. rerioUniProtKB:Q6IQB0 · ZFIN:ZDB-GENE-040625-92 (vamp4)vesicle-associated membrane protein 4⌘
D. rerioENSEMBL:ENSDARG00000070137 · UniProtKB:Q6IQK3
D. rerioENSEMBL:ENSDARG00000070161 · UniProtKB:Q6IQK3
D. rerioUniProtKB:Q6PBJ3 · ZFIN:ZDB-GENE-040426-2725 (vamp1)vesicle-associated membrane protein 1⌘
D. rerioUniProtKB:Q7SZZ5 · ZFIN:ZDB-GENE-030131-8225 (vamp2)vesicle-associated membrane protein 2⌘
D. discoideumUniProtKB:Q6TMJ9 · dictyBase:DDB_G0280061 (sybA)synaptobrevin domain-containing protein⌘
D. melanogasterUniProtKB:P18489 · FB:FBgn0003660 (J · c-Syb · syb · l(2)46El · 21.15 · VAMP · Syb · synaptobrevin · Vamp · l(2)46CFq · Synaptobrevin · CG12210)Vesicle-associated membrane protein · Complementation group J⌘
G. gallusNCBI:XP_001233852 · ENTREZ:770513
G. gallusNCBI:XP_422640 · ENTREZ:424827
G. gallusNCBI:NP_001034575 · ENTREZ:418273
G. gallusNCBI:NP_001034578 · ENTREZ:419368
H. sapiensENSEMBL:ENSG00000139190 · UniProtKB:P23763 (IPI00332864 · VAMP1 · P23763 · VAMP1_HUMAN · IPI00012898 · SYB1 · IPI00397527)Vesicle-associated membrane protein 1⌘
H. sapiensENSEMBL:ENSG00000179036 · UniProtKB:P63027 (VAMP2 · IPI00553138 · SYB2 · P63027 · VAMP2_HUMAN)Vesicle-associated membrane protein 2⌘
H. sapiensENSEMBL:ENSG00000049245 · UniProtKB:Q15836 (Q15836 · VAMP3_HUMAN · SYB3 · VAMP3 · IPI00549343)Vesicle-associated membrane protein 3⌘
H. sapiensENSEMBL:ENSG00000117533 · UniProtKB:O75379 (IPI00219648 · O75379 · IPI00299667 · VAMP4_HUMAN · VAMP4)Vesicle-associated membrane protein 4⌘
M. musculusUniProtKB:Q62442 · MGI:MGI:1313276 (Syb1 · VAMP-1 · Vamp1 · Syb-1)vesicle-associated membrane protein 1⌘
M. musculusUniProtKB:P63044 · MGI:MGI:1313277 (Vamp2 · Syb2 · Syb-2)synaptobrevin II · vesicle-associated membrane protein 2⌘
M. musculusUniProtKB:P63024 · MGI:MGI:1321389 (ceb · Vamp3 · VAMP-3 · cellubrevin)vesicle-associated membrane protein 3⌘
M. musculusUniProtKB:O70480 · MGI:MGI:1858730 (Vamp4 · D1Ertd147e)vesicle-associated membrane protein 4⌘
R. norvegicusNCBI:XP_344169 · RGD:1309753
R. norvegicusRGD:3948 (Vamp1) · UniProtKB:Q63666 (IPI00876628 · Syb1 · IPI00876601 · Vamp1 · IPI00211083 · VAMP1_RAT · IPI00876629 · Q63666)vesicle-associated membrane protein 1 · Vesicle-associated membrane protein 1⌘⌘
R. norvegicusUniProtKB:P63045 · RGD:3949 (Vamp2)vesicle-associated membrane protein 2⌘
R. norvegicusUniProtKB:P63025 · RGD:61880 (Vamp3)vesicle-associated membrane protein 3⌘
S. cerevisiaeUniProtKB:P31109 · SGD:S000000028 (YAL030W · SNC1)Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane⌘
S. cerevisiaeUniProtKB:P33328 · SGD:S000005854 (SNC2 · YOR327C)Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane⌘
S. pombeUniProtKB:Q92356 · GeneDB_Spombe:SPAC6G9.11 (SPAC6G9.11 · syb1)SNAP receptor, synaptobrevin family⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu