P-POD: Princeton Protein Orthology Database: GO3/Para2618

This family has 15 members: 3 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 2 Gallus gallus, 1 Homo sapiens, 2 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Para2618
15 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2014515 (F15K9.12 · F15K9_12 · AT1G03280) · NCBI:NP_563681.1⌘
A. thalianaNCBI:NP_193813.1 · TAIR:locus:2121524 (F21C20_160 · F21C20.160 · AT4G20810)⌘
A. thalianaNCBI:NP_193767.2 · TAIR:locus:2128590 (F9F13_4 · F9F13.4 · AT4G20340)⌘
C. elegansWB:WBGene00013998 (ZK550.4) · UniProtKB:O62513⌘
D. rerioZFIN:ZDB-GENE-041210-221 (si:ch211-194d6.2) · UniProtKB:Q5SQE1⌘
D. discoideumUniProtKB:Q557M8 · dictyBase:DDB_G0273525 (TFIIE · gtf2e1-1 · gtf2e1)transcription factor IIE⌘
D. melanogasterUniProtKB:O96880 · FB:FBgn0015828 (TfIIEa · TfIIE · TFIIEalpha · TFIIE-L · TFIIE · CG10415 · TfIIEalpha · dTFIIE-L · dTFIIEL)Transcription factor IIEalpha⌘
G. gallusNCBI:XP_416551 · ENTREZ:418328
G. gallusNCBI:XP_426334 · ENTREZ:428778
H. sapiensENSEMBL:ENSG00000153767 · UniProtKB:P29083 (GTF2E1 · IPI00019977 · TF2E1 · P29083 · T2EA_HUMAN)General transcription factor IIE subunit 1⌘
M. musculusNCBI:NP_001028369 · MGI:MGI:2139152
M. musculusUniProtKB:Q9D0D5 · MGI:MGI:1921447 (Gtf2e1 · 56kDa · FE · TFIIE-A)general transcription factor II E, polypeptide 1 (alpha subunit)⌘
R. norvegicusUniProtKB:Q4FZQ9 · RGD:1306851 (Gtf2e1)general transcription factor IIE, polypeptide 1, alpha⌘
S. cerevisiaeUniProtKB:P36100 · SGD:S000001511 (TFA1 · YKL028W)TFIIE large subunit, involved in recruitment of RNA polymerase II to the promoter, activation of TFIIH, and promoter opening⌘
S. pombeUniProtKB:Q9P3W1 · GeneDB_Spombe:SPAC458.07 (SPAPYUG7.01 · tfa1 · SPAC458.07)transcription factor TFIIE alpha subunit Tfa1⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu