P-POD: Princeton Protein Orthology Database: GO3/Para229

This family has 76 members: 20 Arabidopsis thaliana, 6 Caenorhabditis elegans, 6 Danio rerio, 6 Dictyostelium discoideum, 8 Drosophila melanogaster, 4 Gallus gallus, 6 Homo sapiens, 8 Mus musculus, 6 Rattus norvegicus, 1 Saccharomyces cerevisiae, 5 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Para229
76 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_563931.2 · TAIR:locus:2023903 (AT1G13690 · F21F23_13 · F21F23.13 · ATE1)grpe homolog⌘
A. thalianaNCBI:NP_190188.1 · TAIR:locus:2077137 (AT3G46020 · F16L2.230)⌘
A. thalianaNCBI:NP_565646.2 · TAIR:locus:2039590 (F12K2.9 · AT2G27330)⌘
A. thalianaNCBI:NP_568681.1 · TAIR:locus:2171539 (MQL5_18 · AT5G47320 · MQL5.18 · RPS19)RIBOSOMAL PROTEIN S19⌘
A. thalianaNCBI:NP_196780.1 · TAIR:locus:2177033 (MXC9_15 · AT5G12190 · MXC9.15)⌘
A. thalianaNCBI:NP_196239.1 · TAIR:locus:2160752 (AT5G06210 · MBL20_9 · MBL20.9)⌘
A. thalianaNCBI:NP_200179.1 · TAIR:locus:2164042 (MGN6_2 · MGN6.2 · AT5G53680)⌘
A. thalianaNCBI:NP_564591.1 · TAIR:locus:2033888 (F5D21_5 · Y14 · AT1G51510 · F5D21.5)⌘
A. thalianaNCBI:NP_200269.1 · TAIR:locus:2172144 (AT5G54580 · MRB17_8 · MRB17.8)⌘
A. thalianaNCBI:NP_193122.2 · TAIR:locus:2119505 (F18A5.250 · F18A5_250 · AT4G13860)⌘
A. thalianaNCBI:NP_187457.1 · TAIR:locus:2077427 (AT3G08000 · F17A17.34)⌘
A. thalianaNCBI:NP_193121.1 · TAIR:locus:2119495 (F18A5.240 · F18A5_240 · GR-RBP2 · GRP2 · ATGRP2 · AT4G13850)GLYCINE-RICH RNA-BINDING PROTEIN · GLYCINE-RICH RNA-BINDING PROTEIN 2 · GLYCINE RICH PROTEIN 2⌘
A. thalianaNCBI:NP_567594.1 · TAIR:locus:2119797 (F18F4.130 · AT4G20030 · F18F4_130)⌘
A. thalianaNCBI:NP_173298.1 · TAIR:locus:2027438 (F25I16_4 · GR-RBP6 · F25I16.4 · AT1G18630)glycine-rich RNA-binding protein 6⌘
A. thalianaNCBI:NP_189025.1 · TAIR:locus:2076096 (GR-RBP4 · AT3G23830 · F14O13.2 · GRP4)GLYCINE-RICH RNA-BINDING PROTEIN 4⌘
A. thalianaNCBI:NP_200183.1 · TAIR:locus:2164082 (AT5G53720 · MGN6_7 · MGN6.7)⌘
A. thalianaNCBI:NP_001119208.1 · TAIR:locus:4515103555 (AT5G11412)⌘
A. thalianaNCBI:NP_181287.1 · TAIR:locus:2049816 (F3G5.30 · F3G5_30 · AT2G37510)⌘
A. thalianaNCBI:NP_179093.1 · TAIR:locus:2060464 (T26I20.3 · AT2G14870 · T26I20_3)⌘
A. thalianaNCBI:NP_200794.1 · TAIR:locus:2168133 (MMN10_9 · MMN10.9 · AT5G59860)⌘
C. elegansWB:WBGene00016808 (C50D2.5) · UniProtKB:Q8ITY4⌘
C. elegansWB:WBGene00011155 (R09B3.2) · UniProtKB:O45712⌘
C. elegansWB:WBGene00011156 (R09B3.3) · UniProtKB:O45713⌘
C. elegansWB:WBGene00011059 (R06C1.4) · UniProtKB:O62337⌘
C. elegansWB:WBGene00008224 (C50B8.1) · UniProtKB:Q18724⌘
C. elegansWB:WBGene00004387 (R07E5.14 · rnp-4) · UniProtKB:Q21832 (R07E5.14 · rnp-4)Protein R07E5.14, confirmed by transcript evidence⌘⌘
D. rerioUniProtKB:A2VD20 · ZFIN:ZDB-GENE-060629-1 (eif4ba)eukaryotic translation initiation factor 4Ba⌘
D. rerioZFIN:ZDB-GENE-060312-43 (zgc:136803) · UniProtKB:Q29RC2⌘
D. rerioZFIN:ZDB-GENE-050306-36 (zgc:110796) · UniProtKB:Q5CZN9⌘
D. rerioZFIN:ZDB-GENE-050306-51 (zgc:110525) · UniProtKB:Q5D018⌘
D. rerioUniProtKB:Q6IQM0 · ZFIN:ZDB-GENE-040625-36 (sf3b14)splicing factor 3B⌘
D. rerioUniProtKB:Q6NYA7 · ZFIN:ZDB-GENE-030131-8563 (eif4bb)eukaryotic translation initiation factor 4Bb⌘
D. discoideumdictyBase:DDB_G0288291 (DDB_G0288291) · UniProtKB:Q54J52⌘
D. discoideumUniProtKB:Q54KH9 · dictyBase:DDB_G0287335 (DDB_G0287335)RNA-binding region RNP-1 domain-containing protein, RNA recognition motif-containing protein RRM⌘
D. discoideumUniProtKB:Q54LY9 · dictyBase:DDB_G0286297 (DDB_G0286297)putative splicing factor 3B 14 kDa subunit, RNA recognition motif-containing protein RRM⌘
D. discoideumUniProtKB:Q54ME8 · dictyBase:DDB_G0286007 (rbm8A)RNA-binding motif protein 8A, RNA recognition motif-containing protein RRM⌘
D. discoideumUniProtKB:Q54WE9 · dictyBase:DDB_G0279695 (DDB_G0279695)RNA recognition motif-containing protein RRM⌘
D. discoideumdictyBase:DDB_G0275027 (DDB_G0275027) · UniProtKB:Q86I71⌘
D. melanogasterFB:FBgn0035692 (CG13298 · cg13298) · UniProtKB:Q9VRV7⌘
D. melanogasterFB:FBgn0033378 (tsunagi · Y14/Tsunagi · y14 · CG8781 · tsu · Y14 · cg8781 · Tsunagi/Y14) · UniProtKB:Q9V535⌘
D. melanogasterUniProtKB:Q0KHQ1 · FB:FBgn0064117 (CG1704 · CG33071ORFA · CG33071 · CG33714 · cg1704 · Dromel_CG33713_FBtr0091704_uORF · CG33071-ORFA)⌘
D. melanogasterUniProtKB:Q7KUX7 · FB:FBgn0010256 (anon-fast-evolving-1B9 · anon-EST:fe1B9 · RRM2 · Rbp2 · eIF4H · rrm2 · CG4429 · cg4429)RNA-binding protein 2⌘
D. melanogasterUniProtKB:Q7PLL3 · FB:FBgn0020660 (eIF-4B-S · EIF-4B · CG10837 · Eif4B · eIF-4B · eIF-4B-L · Dm-eIF4B · eIF4B)Eukaryotic initiation factor 4B⌘
D. melanogasterFB:FBgn0039797 (eIF4H · CG1340 · cg1340) · UniProtKB:Q9VA45⌘
D. melanogasterFB:FBgn0037602 (CG8021 · cg8021) · UniProtKB:Q9VHP3⌘
D. melanogasterFB:FBgn0032822 (cg10466 · CG10466 · anon-WO0140519.255) · UniProtKB:Q9VIS0⌘
G. gallusNCBI:XP_001235249 · ENTREZ:772054
G. gallusNCBI:XP_419986 · ENTREZ:421976
G. gallusNCBI:XP_423964 · ENTREZ:426301
G. gallusUniProtKB:Q5ZMR0 (Q5ZMR0 · IPI00581340 · RCJMB04_1g12) · ENTREZ:417490⌘
H. sapiensENSEMBL:ENSG00000063046 · UniProtKB:P23588 (IPI00012079 · P23588 · EIF4B · IF4B_HUMAN)Eukaryotic translation initiation factor 4B⌘
H. sapiensENSEMBL:ENSG00000106682 · UniProtKB:Q15056 (IF4H_HUMAN · EIF4H · IPI00014263 · IPI00375127 · WSCR1 · Q15056 · WBSCR1 · KIAA0038)Eukaryotic translation initiation factor 4H⌘
H. sapiensENSEMBL:ENSG00000115128 · UniProtKB:Q9Y3B4 (Q9Y3B4 · PM14_HUMAN · IPI00032827 · SF3B14 · CGI-110 · HT006 · HSPC175)Pre-mRNA branch site protein p14⌘
H. sapiensENSEMBL:ENSG00000102317 · UniProtKB:P98179 (IPI00024320 · RBM3_HUMAN · RBM3 · RNPL · P98179)Putative RNA-binding protein 3⌘
H. sapiensENSEMBL:ENSG00000131795 · UniProtKB:Q9Y5S9 (MDS014 · RBM8 · HSPC114 · IPI00001757 · RBM8A · RBM8A_HUMAN · IPI00216659 · Q9Y5S9)RNA-binding protein 8A⌘
H. sapiensENSEMBL:ENSG00000119705 · UniProtKB:Q9GZT3 (DC23 · IPI00009922 · DC50 · Q9GZT3 · SLIRP · C14orf156 · PD04872 · SLIRP_HUMAN)SRA stem-loop-interacting RNA-binding protein, mitochondrial⌘
M. musculusMGI:MGI:3612447 · NCBI:NP_001034607
M. musculusNCBI:XP_001480247 · MGI:MGI:3642874
M. musculusUniProtKB:Q8BGD9 · MGI:MGI:95304 (Eif4b · Eif4a2)eukaryotic translation initiation factor 4B⌘
M. musculusUniProtKB:Q9WUK2 · MGI:MGI:1341822 (Wscr1 · Wbscr1 · D5Ertd355e · Eif4h)eukaryotic translation initiation factor 4H⌘
M. musculusUniProtKB:P59708 · MGI:MGI:1913305 (0610009D07Rik)RIKEN cDNA 0610009D07 gene⌘
M. musculusUniProtKB:O89086 · MGI:MGI:1099460 (Rbm3)RNA binding motif protein 3⌘
M. musculusUniProtKB:Q9CWZ3 · MGI:MGI:1913129 (Rbm8a · Rbm8)RNA binding motif protein 8a⌘
M. musculusUniProtKB:Q9D8T7 · MGI:MGI:1916394 (1810035L17Rik)RIKEN cDNA 1810035L17 gene⌘
R. norvegicusNCBI:XP_001068036 · RGD:1585290 (LOC688717)similar to CG33714-PB, isoform B⌘
R. norvegicusNCBI:XP_575394 · RGD:1565293
R. norvegicusUniProtKB:Q5XI72 · RGD:1359222 (Eif4h)eukaryotic translation initiation factor 4H⌘
R. norvegicusUniProtKB:Q27W01 · RGD:1310099 (Rbm8)RNA binding motif protein 8⌘
R. norvegicusUniProtKB:Q4KM38 · RGD:1311067 (Fusip1)FUS interacting protein (serine-arginine rich) 1⌘
R. norvegicusUniProtKB:Q5RKG9 · RGD:1306479 (Eif4b)eukaryotic translation initiation factor 4B⌘
S. cerevisiaeUniProtKB:P40565 · SGD:S000001444 (YIR005W · SNU17 · IST3)Component of the U2 snRNP, required for the first catalytic step of splicing and for spliceosomal assembly⌘
S. pombeUniProtKB:O94290 · GeneDB_Spombe:SPBC887.05c (SPBC887.05c · cwf29)RNA-binding protein Cwf29⌘
S. pombeUniProtKB:O59670 · GeneDB_Spombe:SPBC29A3.07c (SPBC29A3.07c)U2 snRNP-associated protein Sf3b14 homolog⌘
S. pombeUniProtKB:O14369 · GeneDB_Spombe:SPBC18H10.04c (sce3 · SPBC18H10.04c · tif48)RNA binding protein⌘
S. pombeUniProtKB:O42847 · GeneDB_Spombe:SPAC23A1.09 (SPAC23A1.09)RNA-binding protein⌘
S. pombeUniProtKB:O94359 · GeneDB_Spombe:SPBC428.12c (SPBC428.12c)RNA-binding protein⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
OMIM (1)
ENSEMBL:ENSG00000106682 · UniProtKB:Q15056#194050 WILLIAMS-BEUREN SYNDROME; WBS;;CHROMOSOME 7q11.23 DELETION SYNDROME;;WILLIAMS SYNDROME; WMS; WSHYPERCALCEMIA, INFANTILE, INCLUDED;;SUPRAVALVAR AORTIC STENOSIS, INCLUDED;;ELFIN FACIES WITH HYPERCALCEMIA
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu