This family has 11 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.
Interactive Java Applets: Notung Tree Analysis · Jalview Alignment
| Organism | Protein (Synonyms) | Description | AmiGO |
|---|---|---|---|
| A. thaliana | NCBI:NP_171987.1 · TAIR:locus:2010667 (ATTAF6 · AtTAF6 · F13M7.6 · TAF6 · TAFII59 · AT1G04950 · F13M7_6) | TBP-ASSOCIATED FACTOR 6 · TATA BOX ASSOCIATED FACTOR II 59 |  |
| A. thaliana | NCBI:NP_001031188.1 · TAIR:locus:2020143 | ||
| C. elegans | UniProtKB:Q9GZI6 · WB:WBGene00006387 (W09B6.2 · taf-6.1) | | |
| D. rerio | UniProtKB:Q66HZ5 · ZFIN:ZDB-GENE-040912-23 (taf6) | TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor | |
| D. discoideum | UniProtKB:Q54IW7 · dictyBase:DDB_G0288471 (taf6) | TATA-binding protein-associated-factor | |
| D. melanogaster | UniProtKB:P49847 · FB:FBgn0010417 (d60 · taf60 · dme-TAFII60 · TAFII60(62) · TAFII60 · dTAFII62 · Taf60 · TAF[[II]]60 · TAF[[II]]62 · dTAF[[II]]262 · dTAF6 · TAFII62 · TAF6 · p62 · TAF[[II]]60/62 · dTAF62 · TAF · SR3-4B · dTAF[[II]]62 · dTAF[[II]]60 · Taf[[II]]60 · CG9348 · CG32211 · Taf6 · TFIID · dmTAF6 · TAF60 · Taf62 · TAF60/62 · TAF[[II]]) | TBP-associated factor · Suppressor of Ras85D 3-4B · TBP associated factor 60 · TBP-associated factor 6 · TFIID 62 · TBP-associated factor 60kD · TBP-associated factor 60 | |
| H. sapiens | ENSEMBL:ENSG00000106290 · UniProtKB:P49848 (TAF2E · TAF6_HUMAN · P49848 · TAF6 · IPI00028579 · TAFII70) | Transcription initiation factor TFIID subunit 6 | |
| M. musculus | UniProtKB:Q62311 · MGI:MGI:109129 (80kDa · Taf6 · p80 · Taf2e) | TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor | |
| R. norvegicus | UniProtKB:Q63801 · RGD:1311608 (Taf6) | TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor | |
| S. cerevisiae | UniProtKB:P53040 · SGD:S000003080 (YGL112C · TAF60 · TAF6) | Subunit (60 kDa) of TFIID and SAGA complexes, involved in transcription initiation of RNA polymerase II and in chromatin modification, similar to histone H4 | |
| S. pombe | UniProtKB:O74462 · GeneDB_Spombe:SPCC16C4.18c (taf6 · SPCC16C4.18c · taf50) | histone H4-like TAF Taf6, SAGA complex subunit | |
No functional conservation results.
| Description | Suffix |
|---|---|
| Sequences in this family | .fasta |
| mafft aligned Fasta file | .afasta |
| phyml newick file | .newick |
| Notung rooted & rearranged newick file | .newick.rooting.0.rearrange.0 |
| Notung Homolog Table | .newick.rooting.0.rearrange.0.homologs.csv |