This family has 13 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.
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| Organism | Protein (Synonyms) | Description | AmiGO |
|---|---|---|---|
| A. thaliana | TAIR:locus:2091102 (MLP3.4 · AT3G07590) · NCBI:NP_187416.1 |  | |
| A. thaliana | NCBI:NP_192193.1 · TAIR:locus:2140240 (T5J8.16 · T5J8_16 · AT4G02840) | | |
| C. elegans | WB:WBGene00004916 (snr-3 · T28D9.10) · UniProtKB:Q10013 | | |
| D. rerio | UniProtKB:Q8JHH1 · ZFIN:ZDB-GENE-020419-14 (snrpd1) | small nuclear ribonucleoprotein D1 polypeptide | |
| D. discoideum | UniProtKB:Q54YX5 · dictyBase:DDB_G0278027 (snrpD1) | LSM (like-Sm) domain-containing protein, putative small nuclear ribonucleoprotein D1 | |
| D. melanogaster | UniProtKB:Q9VU02 · FB:FBgn0016940 (snRNP-69D · snRNP · CG10753 · BcDNA:RE39488 · SmD1 · snRNP69D) | small nuclear ribonucleoprotein at 69D | |
| G. gallus | NCBI:XP_001235936 · ENTREZ:776411 | ||
| H. sapiens | ENSEMBL:ENSG00000167088 · UniProtKB:P62314 (IPI00302850 · SNRPD1 · P62314 · SMD1_HUMAN) | Small nuclear ribonucleoprotein Sm D1 | |
| M. musculus | UniProtKB:P62315 · MGI:MGI:98344 (Snrpd1 · SMD1) | small nuclear ribonucleoprotein D1 | |
| R. norvegicus | NCBI:XP_001071688 · RGD:1586777 | ||
| R. norvegicus | NCBI:XP_214621 · RGD:1306345 (Snrpd1) | small nuclear ribonucleoprotein D1 | |
| S. cerevisiae | UniProtKB:Q02260 · SGD:S000003306 (SPP92 · SMD1 · YGR074W) | Core Sm protein Sm D1 | |
| S. pombe | UniProtKB:O42661 · GeneDB_Spombe:SPAC27D7.07c (SPAC27D7.07c · smd1) | Sm snRNP core protein Smd1 | |
| Protein | Publication | Curator Notes | |
|---|---|---|---|
| UniProtKB:Q02260 · SGD:S000003306 |  8346029 Rymond BC, et al. Human snRNP polypeptide D1 promotes pre-mRNA splicing in yeast and defines nonessential yeast Smd1p sequences. Nucleic Acids Res. 1993 Jul 25;21(15):3501-5. | The H. sapiens protein P62314 complements a homologous mutation in S. cerevisiae. |
| Description | Suffix |
|---|---|
| Sequences in this family | .fasta |
| mafft aligned Fasta file | .afasta |
| phyml newick file | .newick |
| Notung rooted & rearranged newick file | .newick.rooting.0.rearrange.0 |
| Notung Homolog Table | .newick.rooting.0.rearrange.0.homologs.csv |
| SGD Disease Papers (1) | |
|---|---|
| UniProtKB:Q02260 · SGD:S000003306 | 10369684 Salgado-Garrido J, et al. (1999) Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin. EMBO J 18(12):3451-62 |