P-POD: Princeton Protein Orthology Database: GO3/Para16073

This family has 54 members: 53 Arabidopsis thaliana, 1 Saccharomyces cerevisiae.

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GO3/Para16073
54 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_171778.1 · TAIR:locus:2024680 (AT1G02790 · POLYGALACTURONASE · T14P4.31 · PGA4)POLYGALACTURONASE 4⌘
A. thalianaNCBI:NP_175003.1 · TAIR:locus:2030797 (F2H10.12 · AT1G43080 · F2H10_12)⌘
A. thalianaNCBI:NP_565232.1 · TAIR:locus:2016314 (F18B13_25 · F18B13.25 · AT1G80170)⌘
A. thalianaNCBI:NP_180874.1 · TAIR:locus:2046555 (F25I18_10 · F25I18.10 · AT2G33160)⌘
A. thalianaNCBI:NP_180230.1 · TAIR:locus:2066251 (T9J22_29 · AT2G26620 · T9J22.29)⌘
A. thalianaNCBI:NP_193552.1 · TAIR:locus:2141877 (T9A21.20 · T9A21_20 · AT4G18180)⌘
A. thalianaNCBI:NP_181914.1 · TAIR:locus:2043974 (F18O19.3 · AT2G43860)⌘
A. thalianaNCBI:NP_181915.1 · TAIR:locus:2043924 (AT2G43870 · F18O19.2)⌘
A. thalianaNCBI:NP_198105.2 · TAIR:locus:2146370 (F21A20.240 · AT5G27530)⌘
A. thalianaNCBI:NP_194964.2 · TAIR:locus:2127836 (AT4G32380 · F8B4_80 · F8B4.80)⌘
A. thalianaNCBI:NP_563875.3 · TAIR:locus:2019963 (F20B24.8 · F20B24_8 · AT1G10640)⌘
A. thalianaNCBI:NP_191544.2 · TAIR:locus:2080422 (F24G16.120 · AT3G59850)⌘
A. thalianaNCBI:NP_197222.1 · TAIR:locus:2167185 (MKP11_14 · AT5G17200 · MKP11.14)⌘
A. thalianaNCBI:NP_566524.1 · TAIR:locus:2093212 (AT3G15720 · MSJ11.12)⌘
A. thalianaNCBI:NP_199296.1 · TAIR:locus:2156314 (K23L20.18 · AT5G44830 · K23L20_18)⌘
A. thalianaNCBI:NP_181560.1 · TAIR:locus:2063114 (T7M7.10 · AT2G40310)⌘
A. thalianaNCBI:NP_199297.1 · TAIR:locus:2155292 (K21C13.1 · K21C13_1 · AT5G44840)⌘
A. thalianaNCBI:NP_176064.1 · TAIR:locus:2027534 (AT1G56710 · F25P12_85 · F25P12.85)⌘
A. thalianaNCBI:NP_175244.1 · TAIR:locus:2023817 (F21D18.18 · F21D18_18 · AT1G48100)⌘
A. thalianaNCBI:NP_189293.1 · TAIR:locus:2088842 (MFE16.14 · AT3G26610)⌘
A. thalianaNCBI:NP_177207.1 · TAIR:locus:2026795 (AT1G70500 · F24J13.7 · F24J13_7)⌘
A. thalianaNCBI:NP_188020.1 · TAIR:locus:2088252 (MDC16.32 · AT3G14040)⌘
A. thalianaNCBI:NP_187454.2 · TAIR:locus:2077407 (QRT2 · AT3G07970 · F17A17.31)QUARTET 2⌘
A. thalianaNCBI:NP_173158.1 · TAIR:locus:2020352 (F20D23_15 · F20D23.15 · AT1G17150)⌘
A. thalianaNCBI:NP_172057.1 · TAIR:locus:2031963 (F3F20.11 · AT1G05660 · F3F20_11)⌘
A. thalianaNCBI:NP_680757.1 · TAIR:locus:504955462 (AT4G32375)⌘
A. thalianaNCBI:NP_173760.2 · TAIR:locus:2028844 (AT1G23460 · F28C11.9)⌘
A. thalianaNCBI:NP_563654.1 · TAIR:locus:2196055 (T6A9.22 · AT1G02460)⌘
A. thalianaNCBI:NP_179147.1 · TAIR:locus:2047223 (AT2G15450 · F26H6_3 · F26H6.3)⌘
A. thalianaNCBI:NP_187442.1 · TAIR:locus:2077442 (F17A17.19 · AT3G07850)⌘
A. thalianaNCBI:NP_175005.1 · TAIR:locus:2030803 (F2H10_10 · AT1G43100 · F2H10.10)⌘
A. thalianaNCBI:NP_187441.1 · TAIR:locus:2077437 (F17A17.18 · AT3G07840)⌘
A. thalianaNCBI:NP_191310.1 · TAIR:locus:2103478 (AT3G57510 · T8H10.110 · ADPG1)⌘
A. thalianaNCBI:NP_564758.2 · TAIR:locus:2036581 (F8A5.12 · AT1G60590 · F8A5_12)⌘
A. thalianaNCBI:NP_195292.2 · TAIR:locus:2128023 (F8D20.180 · AT4G35670 · F8D20_180)⌘
A. thalianaNCBI:NP_196969.1 · TAIR:locus:2222657 (T15N1.140 · T15N1_140 · AT5G14650)⌘
A. thalianaNCBI:NP_181917.1 · TAIR:locus:2051764 (AT2G43890 · F6E13.2)⌘
A. thalianaNCBI:NP_178131.1 · TAIR:locus:2016239 (F18B13.22 · AT1G80140 · F18B13_22)⌘
A. thalianaNCBI:NP_179149.2 · TAIR:locus:2047153 (F26H6.16 · AT2G15470)⌘
A. thalianaNCBI:NP_198807.1 · TAIR:locus:2178052 (MYH19.70 · AT5G39910 · MYH19_70)⌘
A. thalianaNCBI:NP_187440.1 · TAIR:locus:2077412 (AT3G07830 · F17A17.17)⌘
A. thalianaNCBI:NP_172056.1 · TAIR:locus:2031953 (F3F20.10 · F3F20_10 · AT1G05650)⌘
A. thalianaNCBI:NP_199625.1 · TAIR:locus:2164773 (MIF21_3 · MIF21.3 · AT5G48140)⌘
A. thalianaNCBI:NP_850359.1 · TAIR:locus:2054396 (PGAZAT · T11A7.5 · T11A7_5 · AT2G41850 · ADPG2)POLYGALACTURONASE ABSCISSION ZONE A. THALIANA · ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2⌘
A. thalianaNCBI:NP_193112.2 · TAIR:locus:2119485 (F18A5_150 · F18A5.150 · AT4G13760)⌘
A. thalianaNCBI:NP_175004.1 · TAIR:locus:2030791 (F2H10.11 · AT1G43090 · F2H10_11)⌘
A. thalianaNCBI:NP_179148.1 · TAIR:locus:2047218 (F26H6.2 · AT2G15460 · F26H6_2)⌘
A. thalianaNCBI:NP_192098.2 · TAIR:locus:2141345 (T7B11_15 · T7B11.15 · AT4G01890)⌘
A. thalianaNCBI:NP_176735.1 · TAIR:locus:2034131 (AT1G65570 · F5I14_10 · F5I14.10)⌘
A. thalianaNCBI:NP_187439.1 · TAIR:locus:2077402 (AT3G07820 · F17A17.16)⌘
A. thalianaNCBI:NP_181916.1 · TAIR:locus:2043894 (F6E13.1 · AT2G43880)⌘
A. thalianaTAIR:locus:2032125 (F3F9_9 · AT1G78400 · F3F9.9) · NCBI:NP_177961.2⌘
A. thalianaNCBI:NP_194963.2 · TAIR:locus:2127821 (AT4G32370 · F8B4_70 · F8B4.70)⌘
S. cerevisiaeUniProtKB:P47180 · SGD:S000003914 (YJR153W · PGU1 · PSM1 · PGL1)Endo-polygalacturonase, pectolytic enzyme that hydrolyzes the alpha-1,4-glycosidic bonds in the rhamnogalacturonan chains in pectins⌘
ProteinPublicationCurator Notes
UniProtKB:P47180 · SGD:S000003914PMID:10206190 Siekstele R, et al. Cloning, targeted disruption and heterologous expression of the Kluyveromyces marxianus endopolygalacturonase gene (EPG1). Yeast. 1999 Mar 15;15(4):311-22.The K. marxianus protein EPG1 was expressed in S. cerevisiae, but complementation was not directly tested. This paper shows functional expression of Kluyveromyces marxianus EPG1 in Saccharomyces cerevisiae, but not complementation.
DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
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