This family has 13 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.
Interactive Java Applets: Notung Tree Analysis · Jalview Alignment
| Organism | Protein (Synonyms) | Description | AmiGO |
|---|---|---|---|
| A. thaliana | TAIR:locus:2152099 (AT5G65900 · K14B20_7 · K14B20.7) · NCBI:NP_201391.1 |  | |
| A. thaliana | NCBI:NP_188490.1 · TAIR:locus:2086909 (K24M9.9 · AT3G18600) | | |
| C. elegans | WB:WBGene00015232 (B0511.6) · UniProtKB:O61815 | | |
| D. rerio | UniProtKB:Q6DRL1 · ZFIN:ZDB-GENE-030131-9685 (ddx18) | DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 | |
| D. discoideum | UniProtKB:Q54S03 · dictyBase:DDB_G0282741 (ddx18) | putative RNA helicase, DEAD/DEAH box helicase | |
| D. melanogaster | FB:FBgn0025140 (PIT · pitchoune · pit · DmRH15 · CG6375) · UniProtKB:Q9VD51 | | |
| G. gallus | NCBI:XP_422125 · ENTREZ:424278 | ||
| H. sapiens | ENSEMBL:ENSG00000088205 · UniProtKB:Q9NVP1 (Q9NVP1 · DDX18 · IPI00301323 · DDX18_HUMAN) | ATP-dependent RNA helicase DDX18 | |
| M. musculus | UniProtKB:Q8K363 · MGI:MGI:1914192 (Ddx18) | DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 | |
| R. norvegicus | NCBI:XP_577779 · RGD:1566392 | ||
| R. norvegicus | UniProtKB:Q5XHY0 · RGD:1549712 (Ddx18) | DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 | |
| S. cerevisiae | UniProtKB:Q03532 · SGD:S000004903 (YMR290C · HAS1) | ATP-dependent RNA helicase | |
| S. pombe | UniProtKB:Q09916 · GeneDB_Spombe:SPAC1F7.02c (SPAC1F7.02c) | ATP-dependent RNA helicase Has1 | |
| Protein | Publication | Curator Notes | |
|---|---|---|---|
| UniProtKB:Q03532 · SGD:S000004903 |  15049817 Emery B, et al. Has1p, a member of the DEAD-box family, is required for 40S ribosomal subunit biogenesis in Saccharomyces cerevisiae. Mol Microbiol. 2004 Apr;52(1):141-58. | The C. albicans protein CaHAS1 complements a homologous mutation in S. cerevisiae. |
| Description | Suffix |
|---|---|
| Sequences in this family | .fasta |
| mafft aligned Fasta file | .afasta |
| phyml newick file | .newick |
| Notung rooted & rearranged newick file | .newick.rooting.0.rearrange.0 |
| Notung Homolog Table | .newick.rooting.0.rearrange.0.homologs.csv |