P-POD: Princeton Protein Orthology Database: GO3/Para1070

This family has 26 members: 3 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 2 Drosophila melanogaster, 1 Homo sapiens, 6 Mus musculus, 7 Rattus norvegicus, 2 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

26 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2090759 (AT3G28900 · MLD15.7) · NCBI:NP_189532.1⌘
A. thalianaNCBI:NP_174010.1 · TAIR:locus:2202770 (AT1G26880 · T2P11_7 · T2P11.7)⌘
A. thalianaNCBI:NP_177120.1 · TAIR:locus:2026724 (RPL34 · F24J1.23 · AT1G69620)RIBOSOMAL PROTEIN L34⌘
C. elegansWB:WBGene00004448 (rpl-34 · C42C1.14) · UniProtKB:A3QMC5⌘
D. rerioUniProtKB:Q7ZWJ7 · ZFIN:ZDB-GENE-040426-1033 (rpl34)ribosomal protein L34⌘
D. discoideumUniProtKB:Q54LV8 · dictyBase:DDB_G0286389 (rpl34)S60 ribosomal protein L34⌘
D. melanogasterUniProtKB:Q9VBH8 · FB:FBgn0039406 (RpL34 · L34 · CG6090 · RpL34a)Ribosomal protein L34a⌘
D. melanogasterUniProtKB:Q9VHE5 · FB:FBgn0037686 (anon-EST:fe1E8 · RpL34b · anon-fast-evolving-1E8 · anon-EST:fe1C10 · CG9354 · anon-fast-evolving-1C10)Ribosomal protein L34b⌘
H. sapiensENSEMBL:ENSG00000109475 · UniProtKB:P49207 (IPI00219160 · RPL34 · RL34_HUMAN · P49207)60S ribosomal protein L34⌘
M. musculusNCBI:XP_001478986 · MGI:MGI:3642342
M. musculusNCBI:XP_001475455 · MGI:MGI:3780348
M. musculusNCBI:XP_001481222 · MGI:MGI:3782885
M. musculusNCBI:XP_892698 · MGI:MGI:3648994
M. musculusNCBI:XP_001475165 · MGI:MGI:3642271
M. musculusUniProtKB:Q9D1R9 · MGI:MGI:1915686 (Rpl34)ribosomal protein L34⌘
R. norvegicusRGD:1561086 · NCBI:XP_001068142
R. norvegicusNCBI:XP_001069957 · RGD:1597425 (LOC689061)similar to ribosomal protein L34⌘
R. norvegicusNCBI:XP_344178 · RGD:1564055 (RGD1564055)similar to 60S ribosomal protein L34⌘
R. norvegicusNCBI:XP_001055988 · RGD:1595454
R. norvegicusUniProtKB:P11250 · RGD:1309402 (Rpl34)ribosomal protein L34⌘
R. norvegicusNCBI:XP_001072090 · RGD:1585567
R. norvegicusNCBI:XP_225596 · RGD:1565998
S. cerevisiaeUniProtKB:P87262 · SGD:S000002135 (YER056C-A · RPL34A)Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Bp and has similarity to rat L34 ribosomal protein⌘
S. cerevisiaeUniProtKB:P40525 · SGD:S000001314 (RPL34B · YIL052C)Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Ap and has similarity to rat L34 ribosomal protein⌘
S. pombeUniProtKB:O42846 · GeneDB_Spombe:SPAC23A1.08c (rpl34-1 · rpl3401 · rpl34 · SPAC23A1.08c)60S ribosomal protein L34⌘
S. pombeUniProtKB:Q9URT8 · GeneDB_Spombe:SPCC1322.15 (rpl34-2 · rpl3402 · rpl34 · SPCC1322.15)60S ribosomal protein L34⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu