P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL916

This family has 18 members: 1 Caenorhabditis elegans, 4 Danio rerio, 1 Drosophila melanogaster, 3 Gallus gallus, 3 Homo sapiens, 3 Mus musculus, 3 Rattus norvegicus.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL916
18 members.
OrganismProtein (Synonyms)DescriptionAmiGO
C. elegansUniProtKB:Q20204 · WB:WBGene00004854 (F40E10.4 · slt-1)⌘
D. rerioUniProtKB:Q3S2J2 · ZFIN:ZDB-GENE-030722-3 (slit1a)slit homolog 1a (Drosophila)⌘
D. rerioUniProtKB:Q3Y6S4 · ZFIN:ZDB-GENE-030722-4 (slit1b)slit homolog 1b (Drosophila)⌘
D. rerioUniProtKB:Q9DE36 · ZFIN:ZDB-GENE-010306-3 (slit2)slit (Drosophila) homolog 2⌘
D. rerioUniProtKB:Q9DE37 · ZFIN:ZDB-GENE-010306-4 (slit3)slit (Drosophila) homolog 3⌘
D. melanogasterUniProtKB:P24014 · FB:FBgn0003425 (l(2)05248 · Slit · dSlit · CG8355 · sli · CT21700 · slit · CT37068 · wdh)lethal (2) 05248⌘
G. gallusNCBI:XP_001232041 · ENTREZ:373967
G. gallusNCBI:XP_414503 · ENTREZ:374173
G. gallusNCBI:XP_421715 · ENTREZ:395293
H. sapiensENSEMBL:ENSG00000187122 · UniProtKB:O75093 (SLIT1_HUMAN · KIAA0813 · IPI00296434 · IPI00409702 · O75093 · SLIT1 · SLIL1 · MEGF4)Slit homolog 1 protein⌘
H. sapiensENSEMBL:ENSG00000145147 · UniProtKB:O94813 (SLIT2_HUMAN · IPI00335003 · SLIT2 · IPI00006288 · O94813 · IPI00220114 · SLIL3)Slit homolog 2 protein⌘
H. sapiensENSEMBL:ENSG00000184347 · UniProtKB:O75094 (IPI00017640 · MEGF5 · KIAA0814 · UNQ691/PRO1336 · IPI00409709 · IPI00409710 · SLIT3 · O75094 · SLIL2 · SLIT3_HUMAN)Slit homolog 3 protein⌘
M. musculusUniProtKB:Q80TR4 · MGI:MGI:1315203 (Slit1 · Slil1)slit homolog 1 (Drosophila)⌘
M. musculusUniProtKB:Q9R1B9 · MGI:MGI:1315205 (Slil3 · Drad-1 · Slit2)slit homolog 2 (Drosophila)⌘
M. musculusUniProtKB:Q9WVB4 · MGI:MGI:1315202 (Slit3)slit homolog 3 (Drosophila)⌘
R. norvegicusRGD:69307 (Slit1) · UniProtKB:O88279 (SLIT1_RAT · IPI00389760 · IPI00409985 · IPI00409983 · Slit1 · Megf4 · O88279 · IPI00409984)slit homolog 1 (Drosophila) · Slit homolog 1 protein⌘⌘
R. norvegicusUniProtKB:Q9WVC1 · RGD:69310 (Slit2)slit homolog 2 (Drosophila)⌘
R. norvegicusUniProtKB:O88280 · RGD:69311 (Slit3)slit homolog 3 (Drosophila)⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu