P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL8920

This family has 5 members: 2 Arabidopsis thaliana, 1 Dictyostelium discoideum, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: · Jalview Alignment

5 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_680178.1 · TAIR:locus:504956457 (AT5G21900)⌘
A. thalianaNCBI:NP_178661.2 · TAIR:locus:2051542 (F5K7.20 · AT2G06040 · F5K7_20)⌘
D. discoideumUniProtKB:Q54KC6 · dictyBase:DDB_G0287415 (DDB_G0287415)⌘
S. cerevisiaeUniProtKB:P06779 · SGD:S000003813 (YJR052W · RAD7)Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) during nucleotide excision repair⌘
S. pombeUniProtKB:O74999 · GeneDB_Spombe:SPCC330.02 (SPCC330.02 · rhp7 · SPCC613.14)Rad7 homolog Rhp7⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu