P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL870

This family has 18 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 2 Gallus gallus, 1 Homo sapiens, 3 Mus musculus, 2 Rattus norvegicus, 2 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL870
18 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2197624 (AT1G67430 · T1F15_11 · T1F15.11) · NCBI:NP_176910.1⌘
A. thalianaNCBI:NP_174060.1 · TAIR:locus:2015929 (AT1G27400 · F17L21_19 · F17L21.19)⌘
C. elegansWB:WBGene00004429 (Y48G8AL.8 · rpl-17) · UniProtKB:Q9BL19⌘
D. rerioZFIN:ZDB-GENE-030131-8585 (zgc:65996) · UniProtKB:Q7T1K0⌘
D. discoideumUniProtKB:Q54NG2 · dictyBase:DDB_G0285277 (rpl17)S60 ribosomal protein L17⌘
D. melanogasterUniProtKB:Q9W3W8 · FB:FBgn0029897 (anon-EST:Posey276 · mRpL17 · CG3203 · RpL17)Ribosomal protein L17 · ribosomal protein L17⌘
G. gallusNCBI:XP_001231654 · ENTREZ:770025
G. gallusNCBI:XP_424454 · ENTREZ:426845
H. sapiensENSEMBL:ENSG00000212664 · UniProtKB:P18621 (RL17_HUMAN · RPL17 · P18621 · IPI00413324)60S ribosomal protein L17⌘
M. musculusMGI:MGI:3642871 · NCBI:XP_001478961
M. musculusNCBI:XP_001478107 · MGI:MGI:3704246
M. musculusUniProtKB:Q9CPR4 · MGI:MGI:2448270 (Rpl17)ribosomal protein L17⌘
R. norvegicusNCBI:XP_001057358 · RGD:1562905 (RGD1562905)similar to 60S ribosomal protein L17 (L23)⌘
R. norvegicusUniProtKB:P24049 · RGD:1303019 (Rpl17)ribosomal protein L17⌘
S. cerevisiaeUniProtKB:P05740 · SGD:S000001663 (RPL17A · YKL180W · RPL17)Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similarity to E. coli L22 and rat L17 ribosomal proteins⌘
S. cerevisiaeUniProtKB:P46990 · SGD:S000003713 (RPL17B · YJL177W)Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins⌘
S. pombeUniProtKB:O14339 · GeneDB_Spombe:SPBC2F12.04 (rpl17-1 · SPBC2F12.04 · rpl1701 · rpl17)60S ribosomal protein L17⌘
S. pombeUniProtKB:O59794 · GeneDB_Spombe:SPCC364.03 (SPCC364.03 · rpl1702 · rpl17-2 · rpl17)60S ribosomal protein L17⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu