P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL799

This family has 19 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 3 Mus musculus, 5 Rattus norvegicus, 2 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL799
19 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_193168.1 · TAIR:locus:2129620 (FCAALL.124 · AT4G14320)⌘
A. thalianaNCBI:NP_188981.1 · TAIR:locus:2090885 (MLM24.22 · AT3G23390)⌘
C. elegansWB:WBGene00004454 (C09H10.2 · rpl-41) · UniProtKB:P48166⌘
D. rerioUniProtKB:P61485 · ZFIN:ZDB-GENE-020423-1 (rpl36a)ribosomal protein L36A⌘
D. discoideumUniProtKB:Q55CW5 · dictyBase:DDB_G0270984 (rpl36a)S60 ribosomal protein L36a⌘
D. melanogasterUniProtKB:Q9VLT7 · FB:FBgn0031980 (anon-EST:fe1B2 · RpL36A · anon-fast-evolving-1B2 · CG7424)Ribosomal protein L36A⌘
G. gallusENTREZ:422189 · NCBI:XP_420184
H. sapiensENSEMBL:ENSG00000102391 · UniProtKB:P83881 (RL36A_HUMAN · RPL36A · P83881 · MIG6 · RPL44 · IPI00220344)60S ribosomal protein L36a⌘
M. musculusNCBI:NP_063918 · MGI:MGI:1201789 (Rpl44 · Rpl36a · L44L)ribosomal protein L36A⌘
M. musculusNCBI:XP_001475071 · MGI:MGI:3780887
M. musculusNCBI:NP_079865 · MGI:MGI:1913733 (RPL36A · Rpl36al)ribosomal protein L36A-like⌘
R. norvegicusNCBI:XP_001079893 · RGD:1597567
R. norvegicusNCBI:XP_001080709 · RGD:1593301
R. norvegicusUniProtKB:P83883 · RGD:621156 (Rpl36al)ribosomal protein L36a-like⌘
R. norvegicusUniProtKB:P83883 · RGD:1306640 (Rpl36a)ribosomal protein L36a⌘
R. norvegicusUniProtKB:P83883 · RGD:1566235 (Rpl36a-ps1)ribosomal protein L36a, pseudogene 1⌘
S. cerevisiaeUniProtKB:P02405 · SGD:S000001183 (MAK18 · YHR141C · RPL42B)Protein component of the large (60S) ribosomal subunit, identical to Rpl42Ap and has similarity to rat L44⌘
S. cerevisiaeUniProtKB:P02405 · SGD:S000005106 (YNL162W · RPL42A)Protein component of the large (60S) ribosomal subunit, identical to Rpl42Bp and has similarity to rat L44 ribosomal protein⌘
S. pombeUniProtKB:Q9UTI8 · GeneDB_Spombe:SPAC15E1.03 (rpl42 · SPAC15E1.03 · rpl36a)60S ribosomal protein L36/L42⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu