P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL681

This family has 20 members: 8 Arabidopsis thaliana, 1 Caenorhabditis elegans, 3 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

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GO3/OrthoMCL681
20 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_850277.2 · TAIR:locus:2061789 (T2N18.18 · AT2G37060 · NF-YB8 · T2N18_18)NUCLEAR FACTOR Y, SUBUNIT B8⌘
A. thalianaNCBI:NP_182302.1 · TAIR:locus:2043293 (AT2G47810 · NF-YB5 · F17A22.20)NUCLEAR FACTOR Y, SUBUNIT B5⌘
A. thalianaNCBI:NP_172377.1 · TAIR:locus:2036064 (AT1G09030 · F7G19_10 · F7G19.10 · NF-YB4)NUCLEAR FACTOR Y, SUBUNIT B4⌘
A. thalianaNCBI:NP_178981.1 · TAIR:locus:2054095 (T10F5.11 · T10F5_11 · NF-YB7 · AT2G13570)NUCLEAR FACTOR Y, SUBUNIT B7⌘
A. thalianaNCBI:NP_193190.1 · TAIR:locus:2129885 (NF-YB3 · FCAALL.252 · AT4G14540 · DL3310W)NUCLEAR FACTOR Y, SUBUNIT B3⌘
A. thalianaNCBI:NP_190902.2 · TAIR:locus:2083941 (F4P12.40 · AT3G53340 · NF-YB10)NUCLEAR FACTOR Y, SUBUNIT B10⌘
A. thalianaNCBI:NP_199575.1 · TAIR:locus:2168983 (AT5G47640 · MNJ7_23 · MNJ7.23 · NF-YB2)NUCLEAR FACTOR Y, SUBUNIT B2⌘
A. thalianaNCBI:NP_850304.2 · TAIR:locus:2064996 (HAP3 · ATNF-YB1 · NF-YB1 · T7F6.5 · ATHAP3 · T7F6_5 · AT2G38880 · HAP3A)HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3 · NUCLEAR FACTOR Y, SUBUNIT B1 · HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3A · NUCLEAR FACTOR Y SUBUNIT B1⌘
C. elegansWB:WBGene00021132 (W10D9.4 · nfyb-1) · UniProtKB:O17286 (W10D9.4 · nfyb-1)Putative uncharacterized protein W10D9.4⌘⌘
D. rerioENSEMBL:ENSDARP00000090543
D. rerioZFIN:ZDB-GENE-050417-13 (zgc:110552) · UniProtKB:Q561X4⌘
D. rerioUniProtKB:Q5CZV3 · ZFIN:ZDB-GENE-050306-25 (nfyb)nuclear transcription factor Y, beta⌘
D. discoideumUniProtKB:Q54WV0 · dictyBase:DDB_G0279419 (nfyB)putative histone-like transcription factor, putative CCAAT-binding transcription factor, chain B⌘
D. melanogasterFB:FBgn0032816 (NF-YB · BcDNA:RH50436 · CG10447) · UniProtKB:Q8ST61⌘
G. gallusENTREZ:396205 · UniProtKB:P25207 (NFYB_CHICK · IPI00820911 · P25207 · NFYB · RCJMB04_7n24)Nuclear transcription factor Y subunit beta⌘
H. sapiensENSEMBL:ENSG00000120837 · UniProtKB:P25208 (HAP3 · IPI00013217 · NFYB · NFYB_HUMAN · P25208)Nuclear transcription factor Y subunit beta⌘
M. musculusUniProtKB:P63139 · MGI:MGI:97317 (Nfyb · Cbf-A)nuclear transcription factor-Y beta⌘
R. norvegicusRGD:3172 (Nfyb) · UniProtKB:P63140 (Nfyb · NFYB_RAT · P63140 · IPI00208278)nuclear transcription factor-Y beta · Nuclear transcription factor Y subunit beta⌘⌘
S. cerevisiaeUniProtKB:P13434 · SGD:S000000117 (HAP3 · YBL021C)Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex, a transcriptional activator and global regulator of respiratory gene expression⌘
S. pombeUniProtKB:P36611 · GeneDB_Spombe:SPAC23C11.08 (SPAC23C11.08 · php3)CCAAT-binding factor complex subunit Php3⌘
ProteinPublicationCurator Notes
UniProtKB:P13434 · SGD:S000000117PMID:15756621 Guerrero CA, et al. Salt-dependent expression of ammonium assimilation genes in the halotolerant yeast, Debaryomyces hansenii. Curr Genet. 2005 Mar;47(3):163-71.The D. hansenii protein DhGDH1 was expressed in S. cerevisiae, but complementation was not directly tested. High-level expression of DhGDH1 expression was dependent on GLN3, HAP2, and HAP3.
DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
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