P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL6325

This family has 7 members: 1 Arabidopsis thaliana, 1 Danio rerio, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

7 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_189410.2 · TAIR:locus:2089144 (RCK · ROCK-N-ROLLERS · MER3 · AT3G27730 · MGF10.13)⌘
D. rerioENSEMBL:ENSDARG00000068922 · UniProtKB:A2BIH3
G. gallusNCBI:XP_422349 · ENTREZ:424509
H. sapiensENSEMBL:ENSG00000162669 · UniProtKB:A2PYH4 (IPI00852603 · A2PYH4 · HFM1 · HFM1_HUMAN · IPI00374013 · SEC3D1)Probable ATP-dependent DNA helicase HFM1⌘
M. musculusUniProtKB:Q8CA92 · MGI:MGI:3036246 (Sec63d1 · LOC381663 · Hfm1)HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)⌘
R. norvegicusNCBI:XP_001073516 · RGD:1584010 (Hfm1)HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)⌘
S. cerevisiaeUniProtKB:P51979 · SGD:S000003220 (YGL251C · MER3 · HFM1)Meiosis specific DNA helicase involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu