P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL4962

This family has 8 members: 1 Caenorhabditis elegans, 2 Danio rerio, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL4962
8 members.
OrganismProtein (Synonyms)DescriptionAmiGO
C. elegansWB:WBGene00000222 (F45E6.2 · atf-6) · UniProtKB:Q20435 (F45E6.2 · atf-6)Protein F45E6.2, partially confirmed by transcript evidence⌘⌘
D. rerioENSEMBL:ENSDARP00000061770
D. rerioUniProtKB:Q5RH85 · ENSEMBL:ENSDARG00000012656
D. melanogasterFB:FBgn0033010 (Atf6 · CG3136 · ATF6) · UniProtKB:Q8SX87⌘
G. gallusNCBI:XP_422208 · ENTREZ:424365
H. sapiensENSEMBL:ENSG00000118217 · UniProtKB:P18850 (IPI00002511 · ATF6A_HUMAN · P18850 · ATF6)Cyclic AMP-dependent transcription factor ATF-6 alpha⌘
M. musculusNCBI:NP_001074773 · MGI:MGI:1926157 (ESTM49 · Atf6 · Atf6alpha)activating transcription factor 6⌘
R. norvegicusNCBI:XP_001076843 · RGD:1305471 (Atf6)activating transcription factor 6⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu