P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL4439

This family has 9 members: 1 Danio rerio, 1 Gallus gallus, 2 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

9 members.
OrganismProtein (Synonyms)DescriptionAmiGO
D. rerioUniProtKB:Q566W7 · ZFIN:ZDB-GENE-050417-330 (snx30)sorting nexin family member 30⌘
G. gallusENTREZ:427330 · NCBI:XP_424910
H. sapiensENSEMBL:ENSG00000148158 · UniProtKB:Q5VWJ9 (SNX30 · IPI00855946 · Q5VWJ9 · SNX30_HUMAN)Sorting nexin-30⌘
H. sapiensENSEMBL:ENSG00000162627 · UniProtKB:Q9UNH6 (SNX7 · SNX7_HUMAN · IPI00216576 · Q9UNH6 · IPI00009203)Sorting nexin-7⌘
M. musculusUniProtKB:Q8CE50 · MGI:MGI:2443882 (Snx30)sorting nexin family member 30⌘
R. norvegicusNCBI:XP_001056835 · RGD:1311367
S. cerevisiaeUniProtKB:P47057 · SGD:S000003573 (YJL036W · ATG24 · CVT13 · SNX4)Sorting nexin, involved in retrieval of late-Golgi SNAREs from post-Golgi endosomes to the trans-Golgi network and in cytoplasm to vacuole transport⌘
S. pombeUniProtKB:O14243 · GeneDB_Spombe:SPAC6F6.12 (SPAC6F6.12)autophagy associated protein Atg24⌘
S. pombeUniProtKB:Q9P779 · GeneDB_Spombe:SPBC1711.11 (SPBC1711.11)autophagy associated protein⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu