P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL4030

This family has 10 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

10 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2075676 (AT3G47120 · F13I12.170) · NCBI:NP_190296.1⌘
C. elegansWB:WBGene00016245 (C30B5.4) · UniProtKB:Q18318 (C30B5.4)Putative uncharacterized protein C30B5.4⌘⌘
D. rerioUniProtKB:Q4QRG7 · ZFIN:ZDB-GENE-050626-88 (rbmx2)RNA binding motif protein, X-linked 2⌘
D. discoideumNCBI:EAS66863.1 · dictyBase:DDB_G0294559 (DDB_G0294559)RNA-binding region RNP-1 domain-containing protein, RNA recognition motif-containing protein RRM⌘
D. melanogasterFB:FBgn0032822 (cg10466 · CG10466 · anon-WO0140519.255) · UniProtKB:Q9VIS0⌘
H. sapiensENSEMBL:ENSG00000134597 · UniProtKB:Q9Y388 (Q9Y388 · RBMX2 · RBMX2_HUMAN · CGI-79 · IPI00032597)RNA-binding motif protein, X-linked 2⌘
M. musculusUniProtKB:Q8R0F5 · MGI:MGI:1919414 (CGI-79 · Rbmx2)RNA binding motif protein, X-linked 2⌘
R. norvegicusNCBI:XP_346356 · RGD:1562693 (Rbmx2)RNA binding motif protein, X-linked 2⌘
S. cerevisiaeUniProtKB:P40565 · SGD:S000001444 (YIR005W · SNU17 · IST3)Component of the U2 snRNP, required for the first catalytic step of splicing and for spliceosomal assembly⌘
S. pombeUniProtKB:O94290 · GeneDB_Spombe:SPBC887.05c (SPBC887.05c · cwf29)RNA-binding protein Cwf29⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu