P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL375

This family has 27 members: 4 Arabidopsis thaliana, 1 Caenorhabditis elegans, 2 Danio rerio, 2 Dictyostelium discoideum, 3 Drosophila melanogaster, 3 Gallus gallus, 3 Homo sapiens, 3 Mus musculus, 3 Rattus norvegicus, 1 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL375
27 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:504954904 (AT5G04895) · NCBI:NP_680142.2⌘
A. thalianaNCBI:NP_175298.2 · TAIR:locus:2008144 (F11I4_16 · AT1G48650 · F11I4.16)⌘
A. thalianaNCBI:NP_178223.2 · TAIR:locus:2038796 (AT2G01130 · F10A8.28)⌘
A. thalianaNCBI:NP_850255.1 · TAIR:locus:2039280 (F11F19_17 · F11F19.17 · AT2G35920)⌘
C. elegansWB:WBGene00004355 (rha-1 · T07D4.3) · UniProtKB:Q22307⌘
D. rerioENSEMBL:ENSDARP00000074799
D. rerioENSEMBL:ENSDARG00000061922 · UniProtKB:A3KQN8
D. discoideumNCBI:EAL73211.1 · dictyBase:DDB_G0267516 (dhx57)DEAD/DEAH box helicase, RWD domain-containing protein⌘
D. discoideumUniProtKB:Q869Z1 · dictyBase:DDB_G0275313 (dhx9)ATP-dependent RNA helicase, DEAD/DEAH box helicase⌘
D. melanogasterUniProtKB:P24785 · FB:FBgn0002774 (male-lethal · nap[ts] · mls · male-killer · Maleless · MLE · CG11680 · maleless · mak · mle · nap · mll)maleless-no-action potential · no action potential⌘
D. melanogasterUniProtKB:Q8SWT2 · FB:FBgn0032883 (cg9323 · CG9323 · 38E.15)⌘
D. melanogasterFB:FBgn0030246 (cg1582 · CG1582) · UniProtKB:Q9VZ55⌘
G. gallusNCBI:XP_422834 · ENTREZ:425032
G. gallusNCBI:XP_424198 · ENTREZ:426560
G. gallusNCBI:XP_426893 · ENTREZ:429336
H. sapiensENSEMBL:ENSG00000174953 · UniProtKB:Q9H2U1 (Q9H2U1 · DHX36_HUMAN · MLEL1 · IPI00784170 · IPI00217760 · IPI00027415 · DDX36 · DHX36 · KIAA1488 · RHAU)Probable ATP-dependent RNA helicase DHX36⌘
H. sapiensENSEMBL:ENSG00000163214 · UniProtKB:Q6P158 (IPI00749029 · Q6P158 · IPI00399364 · DHX57_HUMAN · DHX57 · IPI00168885)Putative ATP-dependent RNA helicase DHX57⌘
H. sapiensENSEMBL:ENSG00000135829 · UniProtKB:Q08211 (IPI00844578 · Q08211 · DHX9_HUMAN · LKP · DDX9 · NDH2 · DHX9)ATP-dependent RNA helicase A⌘
M. musculusUniProtKB:Q8VHK9 · MGI:MGI:1919412 (Dhx36 · Ddx36)DEAH (Asp-Glu-Ala-His) box polypeptide 36⌘
M. musculusUniProtKB:Q6P5D3 · MGI:MGI:2147067 (Dhx57)DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57⌘
M. musculusUniProtKB:O70133 · MGI:MGI:108177 (RHA · leukophysin · NDHII · Ddx9 · Dhx9)NDH II · RNA helicase · nuclear DNA helicase II · DEAH (Asp-Glu-Ala-His) box polypeptide 9⌘
R. norvegicusNCBI:XP_227203 · RGD:1308767 (Dhx36)DEAH (Asp-Glu-Ala-His) box polypeptide 36⌘
R. norvegicusNCBI:XP_001066523 · RGD:1308548 (Dhx9)DEAH (Asp-Glu-Ala-His) box polypeptide 9⌘
R. norvegicusUniProtKB:Q4G031 · RGD:1310340 (Dhx57)DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57⌘
S. cerevisiaeUniProtKB:Q06698 · SGD:S000004411 (YLR419W)Putative helicase with limited sequence similarity to human Rb protein⌘
S. pombeUniProtKB:O94536 · GeneDB_Spombe:SPCC895.09c (SPCC895.09c · ucp12)ATP-dependent RNA helicase Ucp1 · ATP-dependent RNA helicase Ucp1 (predicted)⌘
S. pombeUniProtKB:O60114 · GeneDB_Spombe:SPBC15C4.05 (SPBC15C4.05)ATP-dependent RNA/DNA helicase · ATP-dependent RNA/DNA helicase (predicted)⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
SGD Disease Papers (1)
UniProtKB:Q06698 · SGD:S000004411PMID:16181730 Takemura M (2005) Evolutionary history of the retinoblastoma gene from archaea to eukarya. Biosystems 82(3):266-72
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