P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL3159

This family has 11 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL3159
11 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2015233 (F16M19.6 · AT1G63160 · F16M19_6) · NCBI:NP_176504.1⌘
C. elegansWB:WBGene00004338 (F58F6.4 · rfc-2) · UniProtKB:O44175 (F58F6.4 · rfc-2)Rfc (Dna replication factor) family protein 2⌘⌘
D. rerioZFIN:ZDB-GENE-050306-29 (zgc:110810) · UniProtKB:Q5CZN5⌘
D. discoideumUniProtKB:Q54E21 · dictyBase:DDB_G0291868 (rfc2)replication factor C subunit⌘
D. melanogasterUniProtKB:P53034 · FB:FBgn0015287 (l(3)64Ai · rfc4 · RfC40 · rfc · l(3)rfc40 · rfc[40] · 154910_at · BEST:GH24992 · CG14999 · l(3)SH17 · rfc40 · Rfc40)Replication-factor-C 40kD subunit⌘
G. gallusENTREZ:396542 · UniProtKB:P53033 (RFC2_CHICK · IPI00586061 · RFC2 · P53033)Replication factor C subunit 2⌘
H. sapiensENSEMBL:ENSG00000049541 · UniProtKB:P35250 (IPI00218280 · IPI00017412 · RFC2 · RFC2_HUMAN · P35250)Replication factor C subunit 2⌘
M. musculusUniProtKB:Q9WUK4 · MGI:MGI:1341868 (Recc2 · 40kDa · Rfc2)replication factor C (activator 1) 2⌘
R. norvegicusUniProtKB:Q641W4 · RGD:621198 (Rfc2)replication factor C (activator 1) 2⌘
S. cerevisiaeUniProtKB:P40339 · SGD:S000005454 (YOL094C · RFC4)Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon⌘
S. pombeUniProtKB:O94449 · GeneDB_Spombe:SPAC1687.03c (SPAC1687.03c · rfc4)DNA replication factor C complex subunit Rfc4⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
OMIM (1)
ENSEMBL:ENSG00000049541 · UniProtKB:P35250#194050 WILLIAMS-BEUREN SYNDROME; WBS;;CHROMOSOME 7q11.23 DELETION SYNDROME;;WILLIAMS SYNDROME; WMS; WSHYPERCALCEMIA, INFANTILE, INCLUDED;;SUPRAVALVAR AORTIC STENOSIS, INCLUDED;;ELFIN FACIES WITH HYPERCALCEMIA
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu