P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL2647

This family has 12 members: 1 Caenorhabditis elegans, 1 Danio rerio, 1 Drosophila melanogaster, 1 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL2647
12 members.
OrganismProtein (Synonyms)DescriptionAmiGO
C. elegansWB:WBGene00015207 · UniProtKB:Q09217
D. rerioUniProtKB:Q6IQD4 · ZFIN:ZDB-GENE-040625-111 (luc7l)LUC7-like (S. cerevisiae)⌘
D. melanogasterUniProtKB:Q9VVI1 · FB:FBgn0036734 (CG7564)⌘
G. gallusUniProtKB:Q5ZLW7 · ENTREZ:417971
H. sapiensENSEMBL:ENSG00000146963 · UniProtKB:Q9Y383 (LC7L2_HUMAN · IPI00216804 · IPI00006932 · Q9Y383 · CGI-59 · CGI-74 · LUC7L2)Putative RNA-binding protein Luc7-like 2⌘
H. sapiensENSEMBL:ENSG00000007392 · UniProtKB:Q9NQ29 (Q9NQ29 · LUC7L_HUMAN · IPI00410027 · LUC7L1 · LUC7L · IPI00071318 · IPI00410026)Putative RNA-binding protein Luc7-like 1⌘
M. musculusUniProtKB:Q7TNC4 · MGI:MGI:2183260 (CGI-59 · Luc7l2 · CGI-74)LUC7-like 2 (S. cerevisiae)⌘
M. musculusUniProtKB:Q9CYI4 · MGI:MGI:1914228 (Luc7l)Luc7 homolog (S. cerevisiae)-like⌘
R. norvegicusNCBI:XP_231620 · RGD:1308651 (Luc7l2)LUC7-like 2 (S. cerevisiae)⌘
R. norvegicusUniProtKB:Q5FVI7 · RGD:1307542 (Luc7l)LUC7-like (S. cerevisiae)⌘
S. cerevisiaeUniProtKB:Q07508 · SGD:S000002245 (EXM2 · YDL087C · EPE1 · LUC7)Essential protein associated with the U1 snRNP complex⌘
S. pombeUniProtKB:Q9USM4 · GeneDB_Spombe:SPCC16A11.13 (SPCC16A11.13 · usp106 · luc7)U1 snRNP-associated protein Usp106⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu