P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL2552

This family has 12 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL2552
12 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_180270.1 · TAIR:locus:2059319 (AT2G27020 · PAG1 · T20P8_7 · T20P8.7)20S PROTEASOME SUBUNIT PAG1⌘
C. elegansWB:WBGene00003928 (ZK945.2 · pas-7) · UniProtKB:Q09583⌘
D. rerioZFIN:ZDB-GENE-050913-120 (zgc:114044) · UniProtKB:Q4V918⌘
D. discoideumUniProtKB:Q27563 · dictyBase:DDB_G0267408 (rcdX · psmA3 · veg108 · prtD)20S proteasome subunit alpha-3, proteasome subunit alpha type 3, 20S proteasome subunit C8⌘
D. melanogasterUniProtKB:Q9V5C6 · FB:FBgn0023175 (alpha7 · CG1519 · alpha7_dm · Prosalpha7)Proteasome alpha7 subunit · Proteasome alpha3 subunit · 20s proteasome · 20S proteasome⌘
G. gallusENTREZ:423542 · UniProtKB:Q5ZLI2 (RCJMB04_6b22 · IPI00597853 · Q5ZLI2)Proteasome subunit alpha type⌘
H. sapiensENSEMBL:ENSG00000100567 · UniProtKB:P25788 (PSA3_HUMAN · P25788 · PSC8 · PSMA3 · IPI00419249 · IPI00171199)Proteasome subunit alpha type-3⌘
M. musculusUniProtKB:O70435 · MGI:MGI:104883 (Psma3 · Lmpc8)proteasome (prosome, macropain) subunit, alpha type 3⌘
R. norvegicusUniProtKB:P18422 · RGD:1598236 (Psma3l)proteasome subunit alpha type 3-like⌘
R. norvegicusUniProtKB:P18422 · RGD:61844 (Psma3)proteasome (prosome, macropain) subunit, alpha type 3⌘
S. cerevisiaeUniProtKB:P21242 · SGD:S000005889 (PRE10 · YOR362C)Alpha 7 subunit of the 20S proteasome⌘
S. pombeUniProtKB:O59770 · GeneDB_Spombe:SPCC1795.04c (pre10 · SPCC1795.04c)20S proteasome component alpha 7, Pre10⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu