P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL2303

This family has 12 members: 1 Arabidopsis thaliana, 2 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

12 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2039483 (F18A8_15 · F18A8.15 · AT2G26780) · NCBI:NP_850086.1⌘
C. elegansWB:WBGene00010364 · UniProtKB:O45608
C. elegansWB:WBGene00008422 (D2045.2) · UniProtKB:Q18983⌘
D. rerioENSEMBL:ENSDARP00000083382
D. discoideumUniProtKB:Q54JJ7 · dictyBase:DDB_G0288007 (DDB_G0288007)MKIAA0368 protein (Fragment).⌘
D. melanogasterUniProtKB:Q9V677 · FB:FBgn0033698 (CG8858)⌘
G. gallusNCBI:XP_424915 · ENTREZ:427336
H. sapiensENSEMBL:ENSG00000136813 · UniProtKB:Q5VYK3 (ECM29_HUMAN · KIAA0368 · IPI00157790 · ECM29 · Q5VYK3)Proteasome-associated protein ECM29 homolog⌘
M. musculusUniProtKB:Q6PDI5 · MGI:MGI:2140220 (AI314180)expressed sequence AI314180⌘
R. norvegicusNCBI:XP_232937 · RGD:1306148 (RGD1306148)similar to KIAA0368⌘
S. cerevisiaeUniProtKB:P38737 · SGD:S000001022 (ECM29 · YHL030W)Major component of the proteasome⌘
S. pombeUniProtKB:Q9P7H8 · GeneDB_Spombe:SPAC1782.01 (SPAC1782.01 · SPAPYUG7.07)proteasome component⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu