P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL2181

This family has 12 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL2181
12 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_193845.2 · TAIR:locus:2127408 (AT4G21130 · F7J7_70 · F7J7.70 · EMB2271)EMBRYO DEFECTIVE 2271⌘
A. thalianaNCBI:NP_192450.1 · TAIR:locus:2115984 (C6L9.90 · C6L9_90 · AT4G05410)⌘
C. elegansWB:WBGene00020171 · UniProtKB:A9D0C3
D. rerioZFIN:ZDB-GENE-060427-1 · UniProtKB:Q803S2
D. discoideumdictyBase:DDB_G0293412 · UniProtKB:Q54BV0
D. melanogasterFB:FBgn0053505 (CG10220 · CG33505) · UniProtKB:Q8MSW9⌘
G. gallusNCBI:XP_414243 · ENTREZ:415888
H. sapiensENSEMBL:ENSG00000114767 · UniProtKB:O43818 (IPI00217862 · U355K · RNU3IP2 · U3IP2_HUMAN · RRP9 · O43818)U3 small nucleolar RNA-interacting protein 2⌘
M. musculusUniProtKB:Q91WM3 · MGI:MGI:2384313 (D9Wsu10e · Rrp9 · U3-55k · Rnu3ip2 · 55kDa)RRP9, small subunit (SSU) processome component, homolog (yeast)⌘
R. norvegicusNCBI:XP_343470 · RGD:1307881
S. cerevisiaeUniProtKB:Q06506 · SGD:S000006341 (YPR137W · RRP9)Protein involved in pre-rRNA processing, associated with U3 snRNP⌘
S. pombeUniProtKB:Q9P7C0 · GeneDB_Spombe:SPAC2E1P5.05 (SPAC2E1P5.05)U3 snoRNP-associated protein Rrp9⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu