P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL1824

This family has 13 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Escherichia coli, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL1824
13 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2133832 (T15N24.50 · AT4G26600 · T15N24_50) · NCBI:NP_194390.2⌘
A. thalianaNCBI:NP_850927.1 · TAIR:locus:2178393 (AT5G55920)⌘
C. elegansWB:WBGene00021073 (nol-1 · W07E6.1) · UniProtKB:Q9TYV5⌘
D. rerioZFIN:ZDB-GENE-050309-7 (si:dkey-91i17.1) · UniProtKB:A4IGA8⌘
D. discoideumUniProtKB:Q54TL4 · dictyBase:DDB_G0281685 (nol1)NOL1/NOP2/Sun family protein⌘
D. melanogasterUniProtKB:A1Z909 · FB:FBgn0033741 (CG8545)⌘
E. coliUniProtKB:P76273 · ECOLI:G7008-MONOMER (ECK1834 · b1835 · yebU · rsmF · RsmF)16S rRNA m5C1407 methyltransferase⌘
G. gallusNCBI:XP_416502 · ENTREZ:418277
H. sapiensENSEMBL:ENSG00000111641 · UniProtKB:P46087 (NOL1 · NOP2 · IPI00872909 · NOP2_HUMAN · P46087 · IPI00654555)Putative ribosomal RNA methyltransferase NOP2⌘
M. musculusUniProtKB:Q922K7 · MGI:MGI:107891 (Nol1 · Nop2 · 120kDa)NOP2 nucleolar protein homolog (yeast)⌘
R. norvegicusNCBI:XP_001065060 · RGD:1304616 (Nol1)nucleolar protein 1⌘
S. cerevisiaeUniProtKB:P40991 · SGD:S000005005 (NOP2 · YNL061W · YNA1)Probable RNA m(5)C methyltransferase, essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis⌘
S. pombeUniProtKB:O94268 · GeneDB_Spombe:SPBP8B7.20c (SPBP8B7.20c)RNA methyltransferase Nop2⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
SGD Disease Papers (1)
UniProtKB:P40991 · SGD:S000005005PMID:9854021 King M, et al. (1999) A conserved motif in the yeast nucleolar protein Nop2p contains an essential cysteine residue. Biochem J 337 ( Pt 1):29-35
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