P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL1796

This family has 13 members: 4 Arabidopsis thaliana, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/OrthoMCL1796
13 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2202872 (T30E16.10 · AT1G59550 · T30E16_10) · NCBI:NP_176165.1⌘
A. thalianaNCBI:NP_193161.2 · TAIR:locus:2129550
A. thalianaNCBI:NP_973827.1 · TAIR:locus:2204497 (T5E21.7 · AT1G14570 · T5E21_7)⌘
A. thalianaNCBI:NP_566733.1 · TAIR:locus:505006365 (AT3G23605)⌘
D. rerioZFIN:ZDB-GENE-040704-8 (zgc:92437) · UniProtKB:Q6P3G3⌘
D. discoideumUniProtKB:Q55BU7 · dictyBase:DDB_G0270358 (DDB_G0270358)ubiquitin interacting motif (UIM) domain-containing protein, UAS domain-containing protein, UBX domain-containing protein⌘
D. melanogasterFB:FBgn0031664 · UniProtKB:Q7K4I5
G. gallusNCBI:XP_422667 · ENTREZ:424856
H. sapiensENSEMBL:ENSG00000163960 · UniProtKB:O94888 (UBXD7 · UBXN7 · O94888 · UBXN7_HUMAN · IPI00742124 · KIAA0794)UBX domain-containing protein 7⌘
M. musculusMGI:MGI:2146388 · UniProtKB:Q6P5G6
R. norvegicusNCBI:XP_221375 · RGD:1306346 (Ubxn7)UBX domain protein 7⌘
S. cerevisiaeUniProtKB:Q06682 · SGD:S000002738 (UBX5 · YDR330W)UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p⌘
S. pombeUniProtKB:O14048 · GeneDB_Spombe:SPAC2C4.15c (ucp13 · SPAC2C4.15c · ubx2)UBX domain protein Ubx2⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu