P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL1378

This family has 15 members: 3 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 2 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

15 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_180895.1 · TAIR:locus:2051119 (AT2G33370 · F4P9.14)⌘
A. thalianaNCBI:NP_187090.1 · TAIR:locus:2100915 (T27C4_4 · T27C4.4 · emb2171 · AT3G04400)embryo defective 2171⌘
A. thalianaNCBI:NP_563707.1 · TAIR:locus:2018309 (F19P19.5 · AT1G04480 · F19P19_5)⌘
C. elegansWB:WBGene00004435 (rpl-23 · B0336.10) · UniProtKB:P48158⌘
D. rerioUniProtKB:Q6PC14 · ZFIN:ZDB-GENE-030131-8756 (rpl23)ribosomal protein L23⌘
D. discoideumUniProtKB:Q54G86 · dictyBase:DDB_G0290315 (rpl23)S60 ribosomal protein L23⌘
D. melanogasterUniProtKB:P48159 · FB:FBgn0010078 (RPL17A · RpL17A · RpL23 · CG3661 · RL17 · L17 · Rpl17A)Ribosomal protein L17A · Ribosomal protein L23 · ribosomal protein L23⌘
G. gallusENTREZ:420001 · NCBI:XP_418122
H. sapiensENSEMBL:ENSG00000125691 · UniProtKB:P62829 (P62829 · RL23_HUMAN · RPL23 · IPI00010153)60S ribosomal protein L23⌘
M. musculusUniProtKB:P62830 · MGI:MGI:1929455 (Rpl23)ribosomal protein L23⌘
R. norvegicusUniProtKB:P62832 · RGD:62067 (Rpl23)ribosomal protein L23⌘
S. cerevisiaeUniProtKB:P04451 · SGD:S000000919 (YER117W · RPL23B)Protein component of the large (60S) ribosomal subunit, identical to Rpl23Ap and has similarity to E. coli L14 and rat L23 ribosomal proteins⌘
S. cerevisiaeUniProtKB:P04451 · SGD:S000000183 (RPL23A · YBL087C)Protein component of the large (60S) ribosomal subunit, identical to Rpl23Bp and has similarity to E. coli L14 and rat L23 ribosomal proteins⌘
S. pombeUniProtKB:O42867 · GeneDB_Spombe:SPAC3G9.03 (rpl23-1 · SPAC3G9.03 · rpl2301)60S ribosomal protein L23⌘
S. pombeUniProtKB:O42867 · GeneDB_Spombe:SPCC1322.11 (SPCC1322.11 · rpl23-2 · rpl2302)60S ribosomal protein L23⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu