P-POD: Princeton Protein Orthology Database: GO3/OrthoMCL1076

This family has 17 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 2 Danio rerio, 2 Dictyostelium discoideum, 1 Drosophila melanogaster, 2 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

17 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2054477 · NCBI:NP_565706.1
C. elegansWB:WBGene00009322 (F32B6.8 · tbc-3) · UniProtKB:O45434⌘
D. rerioENSEMBL:ENSDARP00000039408
D. rerioUniProtKB:Q6PUR3 · ZFIN:ZDB-GENE-041114-144 (tbc1d22a)TBC1 domain family, member 22a⌘
D. discoideumNCBI:EAL66865.2 · dictyBase:DDB_G0281137
D. discoideumdictyBase:DDB_G0269982 · UniProtKB:Q55CN5
D. melanogasterFB:FBgn0038855 (CG5745) · UniProtKB:Q95RC5⌘
G. gallusNCBI:XP_419261 · ENTREZ:421181
G. gallusUniProtKB:Q5ZMI3 (IPI00583762 · Q5ZMI3 · RCJMB04_1p10) · ENTREZ:428128⌘
H. sapiensENSEMBL:ENSG00000054611 · UniProtKB:Q8WUA7 (Q8WUA7 · C22orf4 · IPI00445622 · TBC1D22A · IPI00011032 · TB22A_HUMAN · IPI00413005)TBC1 domain family member 22A⌘
H. sapiensENSEMBL:ENSG00000065491 · UniProtKB:Q9NU19 (TB22B_HUMAN · C6orf197 · TBC1D22B · Q9NU19 · IPI00002515)TBC1 domain family member 22B⌘
M. musculusMGI:MGI:2681867 · NCBI:NP_941049
M. musculusUniProtKB:Q8R5A6 · MGI:MGI:1289265 (D15Ertd781e · Tbc1d22a)TBC1 domain family, member 22a⌘
R. norvegicusNCBI:XP_001078492 · RGD:1306588
R. norvegicusUniProtKB:Q6U1J1 · RGD:1564987 (Tbc1d22b)TBC1 domain family, member 22B⌘
S. cerevisiaeUniProtKB:Q08484 · SGD:S000005596 (GYP1 · YOR29-21 · YOR070C)Cis-golgi GTPase-activating protein (GAP) for the Rab family members Ypt1p (in vivo) and for Ypt1p, Sec4p, Ypt7p, and Ypt51p (in vitro)⌘
S. pombeUniProtKB:O59737 · GeneDB_Spombe:SPBC530.01 (gyp1 · SPBC530.01)GTPase activating protein Gyp1⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu