P-POD: Princeton Protein Orthology Database: GO3/Nens702

This family has 27 members: 4 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 2 Dictyostelium discoideum, 2 Drosophila melanogaster, 4 Gallus gallus, 3 Homo sapiens, 3 Mus musculus, 2 Rattus norvegicus, 3 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

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GO3/Nens702
27 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2059969 (AT2G42270 · T24P15.18 · T24P15_18) · NCBI:NP_181756.1⌘
A. thalianaNCBI:NP_189410.2 · TAIR:locus:2089144 (RCK · ROCK-N-ROLLERS · MER3 · AT3G27730 · MGF10.13)⌘
A. thalianaNCBI:NP_173520.1 · TAIR:locus:2037375 (F9H16_5 · emb1507 · F9H16.5 · AT1G20960)embryo defective 1507⌘
A. thalianaNCBI:NP_200922.2 · TAIR:locus:2159451 (MAF19.14 · AT5G61140 · MAF19_14)⌘
C. elegansWB:WBGene00012896 (Y46G5A.4) · UniProtKB:Q9U2G0 (Y46G5A.4 · U520_CAEEL)Putative U5 small nuclear ribonucleoprotein 200 kDa helicase⌘⌘
D. rerioENSEMBL:ENSDARG00000068922 · UniProtKB:A2BIH3
D. discoideumUniProtKB:Q54G57 · dictyBase:DDB_G0290389 (ascc3)activating signal cointegrator 1 complex subunit, DEAD/DEAH box helicase, Sec63 domain-containing protein⌘
D. discoideumUniProtKB:Q55CI8 · dictyBase:DDB_G0270042 (ascc3l)DEAD/DEAH box helicase, U5 small nuclear ribonucleoprotein 200 kDa helicase, Sec63 domain-containing protein⌘
D. melanogasterUniProtKB:Q9VUV9 · FB:FBgn0036548 (Brr2 · cg5931 · anon-EST:Liang-1.21 · CG5931)clone 1.21⌘
D. melanogasterFB:FBgn0038344 (CG5205 · cg5205) · UniProtKB:Q9VF56⌘
G. gallusNCBI:XP_419816 · ENTREZ:421790
G. gallusNCBI:XP_422924 · ENTREZ:425133
G. gallusNCBI:XP_422349 · ENTREZ:424509
G. gallusUniProtKB:Q5F463 (IPI00574020 · Q5F463 · RCJMB04_2m11) · ENTREZ:503574⌘
H. sapiensENSEMBL:ENSG00000112249 · UniProtKB:Q8N3C0 (IPI00430472 · HELIC1 · ASCC3 · HELC1_HUMAN · Q8N3C0)Activating signal cointegrator 1 complex subunit 3⌘
H. sapiensENSEMBL:ENSG00000162669 · UniProtKB:A2PYH4 (IPI00852603 · A2PYH4 · HFM1 · HFM1_HUMAN · IPI00374013 · SEC3D1)Probable ATP-dependent DNA helicase HFM1⌘
H. sapiensENSEMBL:ENSG00000144028 · UniProtKB:O75643 (U520_HUMAN · SNRNP200 · HELIC2 · ASCC3L1 · O75643 · IPI00168235 · KIAA0788 · IPI00420014)U5 small nuclear ribonucleoprotein 200 kDa helicase⌘
M. musculusNCBI:NP_796188 · MGI:MGI:2444401 (Snrnp200 · U5-200KD · HELIC2 · Ascc3l1)small nuclear ribonucleoprotein 200 (U5)⌘
M. musculusUniProtKB:Q6PB36 · MGI:MGI:1925237 (Helic1 · Ascc3 · ASC1p200)activating signal cointegrator 1 complex subunit 3⌘
M. musculusUniProtKB:Q8CA92 · MGI:MGI:3036246 (Sec63d1 · LOC381663 · Hfm1)HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)⌘
R. norvegicusNCBI:XP_228345 · RGD:1307995 (Ascc3)activating signal cointegrator 1 complex subunit 3⌘
R. norvegicusNCBI:XP_001073516 · RGD:1584010 (Hfm1)HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)⌘
S. cerevisiaeUniProtKB:P32639 · SGD:S000000974 (YER172C · BRR2 · SLT22 · PRP44 · SNU246 · RSS1)RNA-dependent ATPase RNA helicase (DEIH box)⌘
S. cerevisiaeUniProtKB:P51979 · SGD:S000003220 (YGL251C · MER3 · HFM1)Meiosis specific DNA helicase involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control⌘
S. cerevisiaeUniProtKB:P53327 · SGD:S000003503 (YGR271W · SLH1)Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs⌘
S. pombeUniProtKB:Q9UT24 · GeneDB_Spombe:SPAC9.03c (spp41 · brr2 · SPAC9.03c)U5 snRNP complex subunit Brr2⌘
S. pombeUniProtKB:O60072 · GeneDB_Spombe:SPBC13G1.10c (SPBC13G1.10c · mug81)ATP-dependent RNA helicase Slh1⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu