P-POD: Princeton Protein Orthology Database: GO3/Nens614

This family has 29 members: 6 Arabidopsis thaliana, 3 Caenorhabditis elegans, 4 Danio rerio, 2 Dictyostelium discoideum, 2 Drosophila melanogaster, 2 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 2 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

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GO3/Nens614
29 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_567243.1 · TAIR:locus:2132377 (AXR6 · T10P11_26 · CUL1 · AT4G02570 · T10P11.26 · ATCUL1)ARABIDOPSIS THALIANA CULLIN 1 · CULLIN 1 · AUXIN RESISTANT 6⌘
A. thalianaNCBI:NP_176189.1 · TAIR:locus:2025941
A. thalianaNCBI:NP_174005.1 · TAIR:locus:2200670 (AT1G26830 · CUL3A · CUL3 · ATCUL3 · ATCUL3A · T24P13.25)CULLIN 3 · ARABIDOPSIS THALIANA CULLIN 3A · CULLIN 3A · ARABIDOPSIS THALIANA CULLIN 3⌘
A. thalianaNCBI:NP_177125.3 · TAIR:locus:2205020 (T6C23_13 · AT1G69670 · T6C23.13 · CUL3B · ATCUL3B)CULLIN 3B · ARABIDOPSIS THALIANA CULLIN 3B⌘
A. thalianaNCBI:NP_176188.1 · TAIR:locus:2025881
A. thalianaNCBI:NP_171797.2 · TAIR:locus:2024755 (F22D16_2 · F22D16.2 · ATCUL2 · CUL2 · AT1G02980)CULLIN 2⌘
C. elegansWB:WBGene00000836 (D2045.6 · cul-1) · UniProtKB:Q17389⌘
C. elegansWB:WBGene00000838 (Y108G3AL.1 · cul-3) · UniProtKB:Q17391 (Y108G3AL.1 · Cullin-3 · CUL3_CAEEL · cul-3)⌘⌘
C. elegansWB:WBGene00000841 (K08E7.7 · cul-6) · UniProtKB:Q21346⌘
D. rerioENSEMBL:ENSDARP00000020845
D. rerioUniProtKB:Q6TEL5 · ZFIN:ZDB-GENE-030131-3376 (cul3a)cullin 3a⌘
D. rerioUniProtKB:Q7ZVR2 · ZFIN:ZDB-GENE-030131-2603 (cul1a)cullin 1a⌘
D. rerioUniProtKB:Q802D4 · ZFIN:ZDB-GENE-040426-2887 (cul1b)cullin 1b⌘
D. discoideumUniProtKB:O60999 · dictyBase:DDB_G0291972 (culA)cullin A⌘
D. discoideumUniProtKB:Q9XZJ3 · dictyBase:DDB_G0267384 (culB)cullin B⌘
D. melanogasterFB:FBgn0015509 (cul1 · Cul-1 · lin-19/cul-1 · lin-19-like · l(2)02074 · dCullin1 · CG1877 · Cullin · cullin1 · lin19-like · lin19 · cul-1 · CUL1 · Cul1 · dCul1 · l(2)k01207 · dCul-1 · Cullin1) · UniProtKB:Q24311⌘
D. melanogasterFB:FBgn0001980 (Cullin3 · CG11861 · l(2)br34 · Cullin · mds · cul3 · Cul3 · DMcul-3 · cullin3 · gft/dCul-3 · guftagu · dCul-3 · gft · cullin-3 · br34 · Cullin-3 · medusa · CUL3 · Cul-3 · dCul3 · l35Cd · l(2)35Cd · l(2)06430 · BG:DS07851.2) · UniProtKB:Q9V475⌘
G. gallusNCBI:XP_418878 · ENTREZ:420783
G. gallusNCBI:XP_422620 · ENTREZ:424804
H. sapiensENSEMBL:ENSG00000055130 · UniProtKB:Q13616 (CUL1_HUMAN · CUL1 · Q13616 · Cullin-1 · IPI00014310)⌘
H. sapiensENSEMBL:ENSG00000036257 · UniProtKB:Q13618 (IPI00382458 · Cullin-3 · IPI00014312 · KIAA0617 · IPI00382459 · CUL3 · Q13618 · CUL3_HUMAN)⌘
M. musculusUniProtKB:Q9WTX6 · MGI:MGI:1349658 (Cul1)cullin 1⌘
M. musculusUniProtKB:Q9JLV5 · MGI:MGI:1347360 (Cul3)cullin 3⌘
R. norvegicusNCBI:XP_342680 · RGD:1308157 (Cul1)cullin 1⌘
R. norvegicusNCBI:XP_217454 · RGD:1308190 (Cul3)cullin 3⌘
S. cerevisiaeUniProtKB:Q12018 · SGD:S000002290 (YDL132W · CDC53)Cullin, structural protein of SCF complexes (which also contain Skp1p, Cdc34p, Hrt1p and an F-box protein) involved in ubiquitination⌘
S. cerevisiaeUniProtKB:P53202 · SGD:S000003235 (CUL3 · CULB · YGR003W)Ubiquitin-protein ligase, member of the cullin family with similarity to Cdc53p and human CUL3⌘
S. pombeUniProtKB:O13790 · GeneDB_Spombe:SPAC17G6.12 (cul1 · pcu1 · SPAC17G6.12)cullin 1⌘
S. pombeUniProtKB:Q09760 · GeneDB_Spombe:SPAC24H6.03 (cul3 · SPAC24H6.03 · pcu3)cullin 3⌘
ProteinPublicationCurator Notes
UniProtKB:Q12018 · SGD:S000002290PMID:12058059 Shen WH, et al. Null mutation of AtCUL1 causes arrest in early embryogenesis in Arabidopsis. Mol Biol Cell. 2002 Jun;13(6):1916-28.The A. thaliana protein AT4G02570.1 complements a homologous mutation in S. cerevisiae.
UniProtKB:Q12018 · SGD:S000002290PMID:12058059 Shen WH, et al. Null mutation of AtCUL1 causes arrest in early embryogenesis in Arabidopsis. Mol Biol Cell. 2002 Jun;13(6):1916-28.The A. thaliana protein AT5G46210.1 does not complement a homologous mutation in S. cerevisiae.
UniProtKB:Q12018 · SGD:S000002290PMID:9636170 Lyapina SA, et al. Human CUL1 forms an evolutionarily conserved ubiquitin ligase complex (SCF) with SKP1 and an F-box protein. Proc Natl Acad Sci U S A. 1998 Jun 23;95(13):7451-6.The H. sapiens protein Q13616 complements a homologous mutation in S. cerevisiae.
DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
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