P-POD: Princeton Protein Orthology Database: GO3/Nens424

This family has 36 members: 6 Arabidopsis thaliana, 2 Caenorhabditis elegans, 3 Danio rerio, 3 Dictyostelium discoideum, 2 Drosophila melanogaster, 4 Escherichia coli, 2 Gallus gallus, 3 Homo sapiens, 3 Mus musculus, 3 Rattus norvegicus, 4 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

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GO3/Nens424
36 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2204355 (AT1G76050 · T4O12_210 · T4O12.210) · NCBI:NP_974151.1⌘
A. thalianaNCBI:NP_176031.2 · TAIR:locus:2824464 (F14G9_4 · F14G9.4 · AT1G56345)⌘
A. thalianaNCBI:NP_199927.1 · TAIR:locus:2176232 (AT5G51140 · MWD22.8 · MWD22_8)⌘
A. thalianaNCBI:NP_974416.1 · TAIR:locus:2100539 (AT3G52260 · T25B15.30)⌘
A. thalianaNCBI:NP_178012.2 · TAIR:locus:2037593 (F9K20_4 · AT1G78910 · F9K20.4)⌘
A. thalianaNCBI:NP_188575.1 · TAIR:locus:2090689 (AT3G19440 · MLD14.18)⌘
C. elegansWB:WBGene00019498 (K07E8.7) · UniProtKB:O16686⌘
C. elegansWB:WBGene00013967 · UniProtKB:Q23459
D. rerioENSEMBL:ENSDARP00000080946
D. rerioZFIN:ZDB-GENE-060929-444 (zgc:153465) · UniProtKB:Q08C69⌘
D. rerioZFIN:ZDB-GENE-040801-238 (zgc:92006) · UniProtKB:Q6DBR0⌘
D. discoideumNCBI:EAL66845.1 · dictyBase:DDB_G0281097 (DDB_G0281097)pseudouridine synthase family protein⌘
D. discoideumUniProtKB:Q54N28 · dictyBase:DDB_G0285543 (DDB_G0285543)Probable ribosomal large subunit pseudouridine synthase C protein (EC 4.2.1.70).⌘
D. discoideumdictyBase:DDB_G0280463 (DDB_G0280463) · UniProtKB:Q54VB9⌘
D. melanogasterFB:FBgn0051719 (RluA-1 · multiple · CG31719 · CG13143 · CG7475) · UniProtKB:Q86P70⌘
D. melanogasterFB:FBgn0032256 (RluA-2 · CG6187 · yumo) · UniProtKB:Q9VKU8⌘
E. coliUniProtKB:P0AA37 · ECOLI:EG12609-MONOMER (B0058 · ECK0059 · b0058 · RluA · YabO · yabO · rluA)pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) · 23S rRNA and tRNA pseudouridine synthase⌘
E. coliUniProtKB:P0AA39 · ECOLI:EG11118-MONOMER (YceC · yceC · rluC · ECK1071 · B1086 · b1086 · RluC)23S rRNA pseudouridylate synthase · 23S rRNA pseudouridine synthase⌘
E. coliUniProtKB:P33643 · ECOLI:EG12098-MONOMER (yfiI · ECK2592 · yfil · rluD · RluD · sfhB · b2594)23S rRNA pseudouridine synthase⌘
E. coliUniProtKB:P0AA41 · ECOLI:G7449-MONOMER (yqcB · truC · B2791 · ECK2785 · b2791 · YqcB · TruC)tRNA pseudouridine 65 synthase · tRNA pseudouridine synthase⌘
G. gallusNCBI:XP_001231937 · ENTREZ:768808
G. gallusNCBI:XP_426389 · ENTREZ:428833
H. sapiensENSEMBL:ENSG00000007376 · UniProtKB:Q9UJJ7 (RLUCL · Q9UJJ7 · C16orf40 · IPI00016510 · RPUSD1 · RUSD1_HUMAN)RNA pseudouridylate synthase domain-containing protein 1⌘
H. sapiensENSEMBL:ENSG00000166133 · UniProtKB:Q8IZ73 (IPI00150963 · C15orf19 · RPUSD2 · Q8IZ73 · RUSD2_HUMAN)RNA pseudouridylate synthase domain-containing protein 2⌘
H. sapiensENSEMBL:ENSG00000165526 · UniProtKB:Q96CM3 (RPUSD4 · IPI00304069 · Q96CM3 · RUSD4_HUMAN)RNA pseudouridylate synthase domain-containing protein 4⌘
M. musculusUniProtKB:Q8VCZ8 · MGI:MGI:1919186 (Rpusd1)RNA pseudouridylate synthase domain containing 1⌘
M. musculusUniProtKB:Q149F1 · MGI:MGI:1918066 (Rpusd2)RNA pseudouridylate synthase domain containing 2⌘
M. musculusUniProtKB:Q9CWX4 · MGI:MGI:1919239 (Rpusd4)RNA pseudouridylate synthase domain containing 4⌘
R. norvegicusNCBI:XP_213253 · RGD:1304934 (Rpusd1)RNA pseudouridylate synthase domain containing 1⌘
R. norvegicusNCBI:XP_001080784 · RGD:1306147 (Rpusd2)RNA pseudouridylate synthase domain containing 2⌘
R. norvegicusUniProtKB:Q4QQT0 · RGD:1311268 (Rpusd4)RNA pseudouridylate synthase domain containing 4⌘
S. cerevisiaeUniProtKB:Q06244 · SGD:S000004155 (PUS5 · YLR165C)Pseudouridine synthase, catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA⌘
S. cerevisiaeUniProtKB:P53294 · SGD:S000003401 (YGR169C · PUS6)tRNA:pseudouridine synthase, catalyzes the conversion of uridine to pseudouridine at position 31 in cytoplasmic and mitochondrial tRNAs⌘
S. cerevisiaeUniProtKB:Q12362 · SGD:S000005427 (RIB2 · PUS8 · YOL066C)Bifunctional enzyme with DRAP deaminase and tRNA:pseudouridine synthase activity⌘
S. cerevisiaeUniProtKB:Q12069 · SGD:S000002194 (YDL036C · PUS9)Mitochondrial tRNA:pseudouridine synthase, catalyzes the formation of pseudouridine at position 32 in mitochondrial tRNAs⌘
S. pombeUniProtKB:Q09709 · GeneDB_Spombe:SPAC18B11.02c (SPAC18B11.02c)tRNA pseudouridylate synthase⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu