P-POD: Princeton Protein Orthology Database: GO3/Nens3929

This family has 10 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens3929
10 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_196175.1 · TAIR:locus:2169657 (MOP10_10 · MOP10.10 · EMB2771 · AT5G05560)EMBRYO DEFECTIVE 2771⌘
C. elegansWB:WBGene00003133 (mat-2 · W10C6.1) · UniProtKB:O18191 (mat-2 · W10C6.1)Protein W10C6.1, partially confirmed by transcript evidence⌘⌘
D. discoideumUniProtKB:Q54NC6 · dictyBase:DDB_G0285349 (APC1 · anapc1)anaphase promoting complex subunit 1⌘
D. melanogasterFB:FBgn0004391 (CG9198 · Apc1 · shtd · Shattered · shattered) · UniProtKB:Q9VXV3⌘
G. gallusNCBI:XP_419303 · ENTREZ:421228
H. sapiensENSEMBL:ENSG00000153107 · UniProtKB:Q9H1A4 (IPI00033907 · APC1_HUMAN · TSG24 · ANAPC1 · Q9H1A4)Anaphase-promoting complex subunit 1⌘
M. musculusUniProtKB:P53995 · MGI:MGI:103097 (tsg24 · Apc1 · Anapc1 · Mcpr)anaphase promoting complex subunit 1⌘
R. norvegicusNCBI:XP_001078787 · RGD:1306629 (Anapc1)anaphase promoting complex subunit 1⌘
S. cerevisiaeUniProtKB:P53886 · SGD:S000005116 (APC1 · YNL172W)Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition⌘
S. pombeUniProtKB:Q9URV2 · GeneDB_Spombe:SPBC106.09 (cut4 · apc1 · SPBC106.09)anaphase-promoting complex subunit Apc1⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu