P-POD: Princeton Protein Orthology Database: GO3/Nens3805

This family has 10 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens3805
10 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2075566 (F13I12.10 · AT3G46960) · NCBI:NP_190280.2⌘
C. elegansWB:WBGene00008502 (F01G4.3) · UniProtKB:Q19103⌘
D. rerioUniProtKB:Q1LWQ1 · ZFIN:ZDB-GENE-010430-5 (skiv2l)superkiller viralicidic activity 2 (S. cerevisiae homolog)-like⌘
D. discoideumUniProtKB:Q86K90 · dictyBase:DDB_G0277211 (DDB_G0277211)superkiller viralicidic activity 2-like protein, DEAD/DEAH box helicase⌘
D. melanogasterFB:FBgn0039117 (cg10210 · CG10210 · Ski2/tst · twister · SKI2 · Ski2 · tst) · UniProtKB:Q9VCH8⌘
H. sapiensENSEMBL:ENSG00000206353 · UniProtKB:Q15477 (DDX13 · SKIV2 · W · SKI2W · SKIV2_HUMAN · IPI00414819 · SKIV2L · Q15477)Helicase SKI2W⌘
M. musculusNCBI:NP_067312 · MGI:MGI:1099835 (Skiv2l · Ski2w)superkiller viralicidic activity 2-like (S. cerevisiae)⌘
R. norvegicusUniProtKB:Q6MG76 · RGD:1303059 (Skiv2l)superkiller viralicidic activity 2-like (S. cerevisiae )⌘
S. cerevisiaeUniProtKB:P35207 · SGD:S000004390 (YLR398C · SKI2)Ski complex component and putative RNA helicase, mediates 3'-5' RNA degradation by the cytoplasmic exosome⌘
S. pombeUniProtKB:O59801 · GeneDB_Spombe:SPCC550.03c (SPCC550.03c)Ski complex RNA helicase Ski2⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu