P-POD: Princeton Protein Orthology Database: GO3/Nens3337

This family has 11 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 2 Danio rerio, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

11 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2143196 (F14F8_130 · F14F8.130 · AT5G15750) · NCBI:NP_568321.1⌘
C. elegansWB:WBGene00016740 (C48B6.2) · UniProtKB:O01513⌘
D. rerioENSEMBL:ENSDARG00000069287 · UniProtKB:Q7ZUH7
D. rerioUniProtKB:Q7ZUH7 · ENSEMBL:ENSDARG00000034233
D. melanogasterFB:FBgn0034232 (CG4866 · mRpS4) · UniProtKB:Q7JZ53⌘
G. gallusNCBI:XP_001233605 · ENTREZ:771480
H. sapiensENSEMBL:ENSG00000177971 · UniProtKB:Q9NV31 (Q9NV31 · MRPS4 · C15orf12 · IMP3_HUMAN · IPI00019488 · IMP3)U3 small nucleolar ribonucleoprotein protein IMP3⌘
M. musculusUniProtKB:Q921Y2 · MGI:MGI:1916119 (Imp3)IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)⌘
R. norvegicusNCBI:XP_236276 · RGD:1306825 (Imp3)IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)⌘
S. cerevisiaeUniProtKB:P32899 · SGD:S000001191 (YHR148W · IMP3)Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA⌘
S. pombeUniProtKB:O13835 · GeneDB_Spombe:SPAC19D5.05c (SPAC19D5.05c)U3 snoRNP-associated protein Imp3⌘
ProteinPublicationCurator Notes
UniProtKB:P32899 · SGD:S000001191PMID:12655004 Granneman S, et al. The human Imp3 and Imp4 proteins form a ternary complex with hMpp10, which only interacts with the U3 snoRNA in 60-80S ribonucleoprotein complexes. Nucleic Acids Res. 2003 Apr 1;31(7):1877-87.The M. musculus protein Q921Y2 complements a homologous mutation in S. cerevisiae.
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu