P-POD: Princeton Protein Orthology Database: GO3/Nens3184

This family has 11 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens3184
11 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2047168 (NRPD3 · F26H6_5 · F26H6.5 · NRPE3A · RPB35.5A · AT2G15430 · NRPB3 · RBP36A) · NCBI:NP_179145.1⌘
A. thalianaNCBI:NP_179142.1 · TAIR:locus:2047198 (NRPE3B · RBP36B · AT2G15400 · F26H6_8 · F26H6.8)⌘
C. elegansWB:WBGene00007971 (rpb-3 · C36B1.3) · UniProtKB:Q93338⌘
D. rerioUniProtKB:Q7ZV11 · ZFIN:ZDB-GENE-030131-6609 (polr2c)polymerase (RNA) II (DNA directed) polypeptide C⌘
D. discoideumUniProtKB:Q54DH7 · dictyBase:DDB_G0292244 (rpb3)RNA polymerase II core subunit⌘
D. melanogasterUniProtKB:O97183 · FB:FBgn0026373 (l(2)k05605 · RpII33 · PolII · l(2)34Dg · 152117_at · lethal(2)34Dg · rpII33 · l34Dg · D-rpII33 · RNAP · polII · PolIIo · Rpll33 · RPB3 · br17 · Rpb3 · CG7885 · l(2)br17 · BG:DS00941.10)Pol II · RNA Pol II · RNA pol II · RNA Polymerase II · lethal 17 in the black-reduced region · RNA polII · pol II · RNA polymerase II · RNA polymerase II 33kD subunit⌘
G. gallusNCBI:XP_414001 · ENTREZ:415635
H. sapiensENSEMBL:ENSG00000102978 · UniProtKB:P19387 (RPB3_HUMAN · P19387 · A-152E5.7 · POLR2C · IPI00018288)DNA-directed RNA polymerase II subunit RPB3⌘
M. musculusUniProtKB:P97760 · MGI:MGI:109299 (mRBP31 · Polr2c · RPB3 · Rpo2-3 · 33kDa)polymerase (RNA) II (DNA directed) polypeptide C⌘
S. cerevisiaeUniProtKB:P16370 · SGD:S000001283 (YIL021W · RPB3)RNA polymerase II third largest subunit B44, part of central core⌘
S. pombeUniProtKB:P37382 · GeneDB_Spombe:SPCC1442.10c (SPCC1442.10c · rpb3)DNA-directed RNA polymerase II subunit 3⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu