This family has 12 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.
Interactive Java Applets: Notung Tree Analysis · Jalview Alignment
| Organism | Protein (Synonyms) | Description | AmiGO |
|---|---|---|---|
| A. thaliana | NCBI:NP_197897.3 · TAIR:locus:2179300 (AT5G25150 · TAF5 · F21J6.5) | TBP-ASSOCIATED FACTOR 5 |  |
| C. elegans | WB:WBGene00006386 (F30F8.8 · taf-5) · UniProtKB:O01985 | | |
| D. rerio | UniProtKB:Q6NWB7 · ZFIN:ZDB-GENE-051120-180 (taf5) | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor | |
| D. discoideum | UniProtKB:Q54KH7 · dictyBase:DDB_G0287337 (taf5) | transcription initiation factor TFIID subunit, TFIID subunit | |
| D. melanogaster | UniProtKB:P49846 · FB:FBgn0010356 (TAF[[II]]80/85 · p85 · dTAFii80 · CG7704 · Taf80 · TAF[[II]]80 · TAF[II]80 · TAF[[II]]85 · Taf5 · dTAF[[II]]80 · dmTAF5 · dTAF5 · TAF · TAFII80 · TAF80 · Taf85 · dTAFII85 · TAFII85 · dmTaf5 · d80 · TAF80/85 · TAF5 · Taf[[II]]80 · TFIID · TAF[[II]]) | TBP-associated factor 80 · TBP-associated factor · TBP associated factor 80 · TBP-associated factor 80kD · TFIID 85 · TBP-associated factor 5 | |
| G. gallus | ENTREZ:423872 · UniProtKB:Q5F3I7 (Q5F3I7 · RCJMB04_15p4 · IPI00579493) | | |
| H. sapiens | ENSEMBL:ENSG00000148835 · UniProtKB:Q15542 (TAF5 · IPI00298926 · TAF5_HUMAN · TAF2D · Q15542 · IPI00298925) | Transcription initiation factor TFIID subunit 5 | |
| M. musculus | UniProtKB:Q8C092 · MGI:MGI:2442144 (Taf5) | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor | |
| R. norvegicus | NCBI:XP_219965 · RGD:1311332 (Taf5) | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor | |
| S. cerevisiae | UniProtKB:P38129 · SGD:S000000402 (TAF5 · YBR198C · TAF90) | Subunit (90 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification | |
| S. pombe | UniProtKB:O13282 · GeneDB_Spombe:SPCC5E4.03c (taf5 · SPCC5E4.03c · taf72) | SAGA complex subunit/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5 | |
| S. pombe | UniProtKB:O74319 · GeneDB_Spombe:SPBC15D4.14 (taf73 · taf5l · SPBC15D4.14) | transcription factor TFIID complex subunit Taf5-like | |
No functional conservation results.
| Description | Suffix |
|---|---|
| Sequences in this family | .fasta |
| mafft aligned Fasta file | .afasta |
| phyml newick file | .newick |
| Notung rooted & rearranged newick file | .newick.rooting.0.rearrange.0 |
| Notung Homolog Table | .newick.rooting.0.rearrange.0.homologs.csv |