P-POD: Princeton Protein Orthology Database: GO3/Nens2733

This family has 12 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens2733
12 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_191609.1 · TAIR:locus:2103316 (AT3G60500 · T8B10.160 · G3 · CER7)ECERIFERUM 7⌘
A. thalianaNCBI:NP_566441.1 · TAIR:locus:2089215 (RRP45a · MGH6.11 · AT3G12990)Ribonuclease PH45a⌘
C. elegansWB:WBGene00018154 (exos-9 · F37C12.13) · UniProtKB:Q20128⌘
D. rerioUniProtKB:Q5XJQ5 · ZFIN:ZDB-GENE-041010-180 (exosc9)exosome component 9⌘
D. discoideumUniProtKB:Q55BJ2 · dictyBase:DDB_G0271100 (DDB_G0271100)O74918 Putative exosome complex exonuclease RRP45 (EC 3.1.13.-) (Ribosomal RNA processing protein 45).⌘
D. melanogasterFB:FBgn0030789 (Rrp45 · CG9606 · dRrp45) · UniProtKB:Q8T4A9⌘
G. gallusENTREZ:619530 · UniProtKB:Q6B7Z6 (IPI00579597 · Q6B7Z6)⌘
H. sapiensENSEMBL:ENSG00000123737 · UniProtKB:Q06265 (IPI00845426 · IPI00654592 · Q06265 · PMSCL1 · IPI00029697 · EXOSC9 · IPI00607722 · EXOS9_HUMAN)Exosome complex exonuclease RRP45⌘
M. musculusUniProtKB:Q9JHI7 · MGI:MGI:1355319 (RRP45 · Pmscl1 · p5 · Exosc9 · PM/Scl-75 · p6)exosome component 9⌘
R. norvegicusUniProtKB:Q4QR75 · RGD:1307888 (Exosc9)exosome component 9⌘
S. cerevisiaeUniProtKB:Q05636 · SGD:S000002688 (YDR280W · RRP45)Exosome non-catalytic core component⌘
S. pombeUniProtKB:O74918 · GeneDB_Spombe:SPCC757.08 (SPCC757.08)exosome subunit Rrp45⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
SGD Disease Papers (1)
UniProtKB:Q05636 · SGD:S000002688PMID:10465791 Allmang C, et al. (1999) The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases. Genes Dev 13(16):2148-58
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