P-POD: Princeton Protein Orthology Database: GO3/Nens2343

This family has 13 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

13 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2152099 (AT5G65900 · K14B20_7 · K14B20.7) · NCBI:NP_201391.1⌘
A. thalianaNCBI:NP_188490.1 · TAIR:locus:2086909 (K24M9.9 · AT3G18600)⌘
C. elegansWB:WBGene00015232 (B0511.6) · UniProtKB:O61815⌘
D. rerioUniProtKB:Q6DRL1 · ZFIN:ZDB-GENE-030131-9685 (ddx18)DEAD (Asp-Glu-Ala-Asp) box polypeptide 18⌘
D. discoideumUniProtKB:Q54S03 · dictyBase:DDB_G0282741 (ddx18)putative RNA helicase, DEAD/DEAH box helicase⌘
D. melanogasterFB:FBgn0025140 (PIT · pitchoune · pit · DmRH15 · CG6375) · UniProtKB:Q9VD51⌘
G. gallusNCBI:XP_422125 · ENTREZ:424278
H. sapiensENSEMBL:ENSG00000088205 · UniProtKB:Q9NVP1 (Q9NVP1 · DDX18 · IPI00301323 · DDX18_HUMAN)ATP-dependent RNA helicase DDX18⌘
M. musculusUniProtKB:Q8K363 · MGI:MGI:1914192 (Ddx18)DEAD (Asp-Glu-Ala-Asp) box polypeptide 18⌘
R. norvegicusNCBI:XP_577779 · RGD:1566392
R. norvegicusUniProtKB:Q5XHY0 · RGD:1549712 (Ddx18)DEAD (Asp-Glu-Ala-Asp) box polypeptide 18⌘
S. cerevisiaeUniProtKB:Q03532 · SGD:S000004903 (YMR290C · HAS1)ATP-dependent RNA helicase⌘
S. pombeUniProtKB:Q09916 · GeneDB_Spombe:SPAC1F7.02c (SPAC1F7.02c)ATP-dependent RNA helicase Has1⌘
ProteinPublicationCurator Notes
UniProtKB:Q03532 · SGD:S000004903PMID:15049817 Emery B, et al. Has1p, a member of the DEAD-box family, is required for 40S ribosomal subunit biogenesis in Saccharomyces cerevisiae. Mol Microbiol. 2004 Apr;52(1):141-58.The C. albicans protein CaHAS1 complements a homologous mutation in S. cerevisiae.
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
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