P-POD: Princeton Protein Orthology Database: GO3/Nens2317

This family has 13 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens2317
13 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_849931.1 · TAIR:locus:2056825 (T18C20_7 · T18C20.7 · AT2G03870)⌘
C. elegansWB:WBGene00003081 (ZK593.7 · lsm-7) · UniProtKB:Q23543⌘
D. rerioUniProtKB:Q1LV43 · ZFIN:ZDB-GENE-030131-8284 (lsm7)LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)⌘
D. discoideumUniProtKB:Q54HF6 · dictyBase:DDB_G0289499 (lsm7)LSM (like-Sm) domain-containing protein, putative U6 small nuclear ribonucleoparticle-associated protein⌘
D. melanogasterFB:FBgn0032599 (CG13277 · BcDNA:RH73529) · UniProtKB:Q9VJI7⌘
G. gallusUniProtKB:Q5ZL52 · ENTREZ:420055
H. sapiensENSEMBL:ENSG00000130332 · UniProtKB:Q9UK45 (Q9UK45 · IPI00007163 · LSM7_HUMAN · LSM7)U6 snRNA-associated Sm-like protein LSm7⌘
M. musculusMGI:MGI:3704367 · NCBI:XP_001478216
M. musculusUniProtKB:Q9CQQ8 · MGI:MGI:1913344 (Lsm7)LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)⌘
R. norvegicusNCBI:XP_001074288 · RGD:1597338
R. norvegicusNCBI:XP_343158 · RGD:1305354 (Lsm7)LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)⌘
S. cerevisiaeUniProtKB:P53905 · SGD:S000005091 (YNL147W · LSM7)Lsm (Like Sm) protein⌘
S. pombeUniProtKB:O74499 · GeneDB_Spombe:SPCC285.12 (SPCC285.12 · lsm7)U6 snRNP-associated protein Lsm7⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu