P-POD: Princeton Protein Orthology Database: GO3/Nens2171

This family has 14 members: 1 Caenorhabditis elegans, 2 Danio rerio, 1 Drosophila melanogaster, 2 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens2171
14 members.
OrganismProtein (Synonyms)DescriptionAmiGO
C. elegansUniProtKB:P90961 · WB:WBGene00020246 (T05B11.3 · clic-1)⌘
D. rerioENSEMBL:ENSDARP00000068697
D. rerioUniProtKB:Q6P937 · ZFIN:ZDB-GENE-040426-1986 (clta)clathrin, light chain (Lca)⌘
D. melanogasterUniProtKB:Q9VWA1 · FB:FBgn0024814 (clathrin-light-chain · CLC · Clathrin · CG6948 · Clc · clc · clathrin)Clathrin light chain · clathrin light chain⌘
G. gallusUniProtKB:Q5ZHR7 (IPI00594350 · RCJMB04_33p3 · Q5ZHR7) · ENTREZ:427284⌘
G. gallusUniProtKB:Q5ZKH1 (RCJMB04_10n18 · IPI00582897 · Q5ZKH1) · ENTREZ:416226⌘
H. sapiensENSEMBL:ENSG00000122705 · UniProtKB:P09496 (CLCA_HUMAN · CLTA · IPI00014587 · P09496 · IPI00216393 · IPI00790571)Clathrin light chain A⌘
H. sapiensENSEMBL:ENSG00000175416 · UniProtKB:P09497 (CLCB_HUMAN · IPI00216472 · IPI00014589 · CLTB · P09497)Clathrin light chain B⌘
M. musculusUniProtKB:O08585 · MGI:MGI:894297 (Clta)clathrin, light polypeptide (Lca)⌘
M. musculusUniProtKB:Q6IRU5 · MGI:MGI:1921575 (Cltb)clathrin, light polypeptide (Lcb)⌘
R. norvegicusRGD:70919 (Clta) · UniProtKB:P08081 (CLCA_RAT · IPI00207305 · IPI00230870 · Clta · P08081)clathrin, light chain (Lca) · Clathrin light chain A⌘⌘
R. norvegicusRGD:621353 (Cltb) · UniProtKB:P08082 (P08082 · Cltb · CLCB_RAT · IPI00230927 · IPI00207308)clathrin, light chain (Lcb) · Clathrin light chain B⌘⌘
S. cerevisiaeUniProtKB:P17891 · SGD:S000003399 (SCD4 · YGR167W · CLC1)Clathrin light chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis⌘
S. pombeUniProtKB:Q9USP6 · GeneDB_Spombe:SPBC9B6.08 (SPBC9B6.08 · clc1)clathrin light chain⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu