P-POD: Princeton Protein Orthology Database: GO3/Nens2108

This family has 14 members: 2 Arabidopsis thaliana, 2 Caenorhabditis elegans, 2 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens2108
14 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_200954.1 · TAIR:locus:2161163 (AT5G61460 · MCI2_2 · MIM · MCI2.2 · ATRAD18)hypersensitive to MMS, irradiation and MMC⌘
A. thalianaNCBI:NP_196383.1 · TAIR:locus:2160289 (MBK20_10 · MBK20.10 · AT5G07660)⌘
C. elegansWB:WBGene00007694 (C23H4.6) · UniProtKB:Q93250⌘
C. elegansWB:WBGene00010056 (F54D5.14) · UniProtKB:Q9XTI9⌘
D. rerioENSEMBL:ENSDARP00000076181
D. rerioENSEMBL:ENSDARP00000076074
D. discoideumUniProtKB:Q54I56 · dictyBase:DDB_G0288993 (smc6)structural maintenance of chromosome protein, AAA ATPase domain-containing protein⌘
D. melanogasterFB:FBgn0039164 (CG5524) · UniProtKB:Q9VCB8⌘
G. gallusNCBI:XP_419962 · ENTREZ:421950
H. sapiensENSEMBL:ENSG00000163029 · UniProtKB:Q96SB8 (IPI00816217 · SMC6L1 · SMC6_HUMAN · Q96SB8 · IPI00154528 · SMC6)Structural maintenance of chromosomes protein 6⌘
M. musculusUniProtKB:Q924W5 · MGI:MGI:1914491 (Smc6l1 · Smc6 · SMC6)structural maintenance of chromosomes 6⌘
R. norvegicusNCBI:XP_001068591 · RGD:1311214
S. cerevisiaeUniProtKB:Q12749 · SGD:S000004375 (RHC18 · YLR383W · SMC6)Protein involved in structural maintenance of chromosomes⌘
S. pombeUniProtKB:P53692 · GeneDB_Spombe:SPCC5E4.06 (rad18 · smc6 · SPCC5E4.06)Smc5-6 complex SMC subunit Smc6⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu