P-POD: Princeton Protein Orthology Database: GO3/Nens1390

This family has 18 members: 2 Arabidopsis thaliana, 1 Caenorhabditis elegans, 2 Danio rerio, 1 Dictyostelium discoideum, 2 Drosophila melanogaster, 2 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens1390
18 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_849567.2 · TAIR:locus:2121224 (F20M13.160 · UPL3 · KAKTUS · AT4G38610 · F20M13_160 · AT4G38600 · KAK)UBIQUITIN-PROTEIN LIGASE 3 · UBIQUITIN_PROTEIN LIGASE⌘
A. thalianaNCBI:NP_195908.1 · TAIR:locus:2151306 (AT5G02880 · F9G14.190 · UPL4 · F9G14_190)⌘
C. elegansWB:WBGene00016405 (C34D4.14) · UniProtKB:Q18447⌘
D. rerioENSEMBL:ENSDARG00000061397 · UniProtKB:A3KPN5
D. rerioUniProtKB:Q8JFV5 · ZFIN:ZDB-GENE-030616-153 (hectd1)HECT domain containing 1⌘
D. discoideumUniProtKB:Q54KP2 · dictyBase:DDB_G0287221 (DDB_G0287221)ubiquitin-protein ligase (HECT) domain-containing protein, armadillo repeat-containing protein⌘
D. melanogasterUniProtKB:Q6NR00 · FB:FBgn0032208 (CG5604)⌘
D. melanogasterFB:FBgn0037277 · UniProtKB:Q9VN58
G. gallusNCBI:XP_422603 · ENTREZ:424785
G. gallusNCBI:XP_421227 · ENTREZ:423310
H. sapiensENSEMBL:ENSG00000092148 · UniProtKB:Q9ULT8 (HECD1_HUMAN · KIAA1131 · Q9ULT8 · IPI00328911 · HECTD1)E3 ubiquitin-protein ligase HECTD1⌘
H. sapiensENSEMBL:ENSG00000153827 · UniProtKB:Q14669 (KIAA0045 · Q14669 · TRIP12 · IPI00871861 · TRIPC_HUMAN)Probable E3 ubiquitin-protein ligase TRIP12⌘
M. musculusNCBI:NP_598736 · MGI:MGI:1309481 (Trip12 · Gtl6)thyroid hormone receptor interactor 12⌘
M. musculusNCBI:NP_659037 · MGI:MGI:2384768 (opm · Hectd1)HECT domain containing 1⌘
R. norvegicusNCBI:XP_343061 · RGD:1561653 (Hectd1)HECT domain containing 1⌘
R. norvegicusUniProtKB:Q497C1 (IPI00362998 · Q497C1 · Trip12) · RGD:1306607 (Trip12)thyroid hormone receptor interactor 12⌘⌘
S. cerevisiaeUniProtKB:P33202 · SGD:S000001493 (YKL010C · UFD4)Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p, two subunits of the 19S particle of the 26S proteasome⌘
S. pombeUniProtKB:Q10435 · GeneDB_Spombe:SPAC12B10.01c (SPAC31F12.02c · SPAC12B10.01c · SPAC637.15c)ubiquitin-protein ligase E3⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu