P-POD: Princeton Protein Orthology Database: GO3/Nens1335

This family has 18 members: 3 Arabidopsis thaliana, 1 Caenorhabditis elegans, 3 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens1335
18 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2005719 (F10A5_22 · AT1G75560 · F10A5.22) · NCBI:NP_565112.1⌘
A. thalianaNCBI:NP_195326.1 · TAIR:locus:2135139 (T19K4_150 · T19K4.150 · CSDP1 · AT4G36020)cold shock domain protein 1⌘
A. thalianaNCBI:NP_565427.1 · TAIR:locus:2827810 (T13L16_11 · T13L16.11 · AT2G17870)⌘
C. elegansWB:WBGene00019537 (K08D12.3) · UniProtKB:Q966I7⌘
D. rerioENSEMBL:ENSDARP00000076953
D. rerioENSEMBL:ENSDARP00000095293
D. rerioUniProtKB:Q801Z9 · ZFIN:ZDB-GENE-030131-5045 (zff9)zinc finger protein 9⌘
D. discoideumUniProtKB:Q54BY8 · dictyBase:DDB_G0293328 (DDB_G0293328)⌘
D. melanogasterFB:FBgn0034802 (anon-fast-evolving-2B6 · anon-EST:fe2B6 · anon-EST:fe1B4 · CG3800 · anon-fast-evolving-1B4 · CG11716 · BEST:GM06241) · UniProtKB:Q8T8R1⌘
G. gallusENTREZ:395731 · UniProtKB:O42395 (CNBP_CHICK · CNBP · O42395 · ZNF9 · IPI00582111)Cellular nucleic acid-binding protein⌘
H. sapiensENSEMBL:ENSG00000169714 · UniProtKB:P62633 (IPI00430814 · CNBP · ZNF9 · CNBP_HUMAN · P62633 · RNF163 · IPI00430812 · IPI00430813)Cellular nucleic acid-binding protein⌘
H. sapiensENSEMBL:ENSG00000187969 · UniProtKB:Q8WW36 (IPI00397484 · Q8WW36 · ZCH13_HUMAN · ZCCHC13)Zinc finger CCHC domain-containing protein 13⌘
M. musculusNCBI:NP_083434 · MGI:MGI:1922314 (Cnbp2 · Zcchc13)zinc finger, CCHC domain containing 13⌘
M. musculusUniProtKB:P53996 · MGI:MGI:88431 (Cnbp · Znf9)cellular nucleic acid binding protein⌘
R. norvegicusNCBI:XP_001055840 · RGD:1589760 (LOC302399)similar to cellular nucleic acid binding protein 2⌘
R. norvegicusUniProtKB:P62634 · RGD:621807 (Cnbp)CCHC-type zinc finger, nucleic acid binding protein⌘
S. cerevisiaeUniProtKB:P53849 · SGD:S000005199 (YNL255C · GIS2)Protein with seven cysteine-rich CCHC zinc-finger motifs, similar to human CNBP, proposed to be involved in the RAS/cAMP signaling pathway⌘
S. pombeUniProtKB:P36627 · GeneDB_Spombe:SPAC13D6.02c (SPAC13D6.02c · byr3)zinc finger protein Byr3⌘
ProteinPublicationCurator Notes
UniProtKB:P53849 · SGD:S000005199PMID:21232131 Scherrer T, et al. Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins. Genome Biol. 2011;12(1):R3.The H. sapiens protein CNBP complements a homologous mutation in S. cerevisiae.
DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
OMIM (1)
ENSEMBL:ENSG00000169714 · UniProtKB:P62633#602668 DYSTROPHIA MYOTONICA 2; DM2;;MYOTONIC DYSTROPHY 2;;PROXIMAL MYOTONIC MYOPATHY; PROMM;;MYOTONIC MYOPATHY, PROXIMAL;;RICKER SYNDROME
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