P-POD: Princeton Protein Orthology Database: GO3/Nens1169

This family has 20 members: 3 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 3 Homo sapiens, 3 Mus musculus, 1 Rattus norvegicus, 2 Saccharomyces cerevisiae, 3 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Nens1169
20 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_568179.1 · TAIR:locus:2169339 (T28J14.30 · AT5G07090)⌘
A. thalianaNCBI:NP_200650.1 · TAIR:locus:2171198 (AT5G58420 · MQJ2.1 · MQJ2_1)⌘
A. thalianaNCBI:NP_565414.1 · TAIR:locus:2827612 (F5J6_12 · F5J6.12 · AT2G17360)⌘
C. elegansWB:WBGene00004473 (rps-4 · Y43B11AR.4) · UniProtKB:Q9N3X2 (rps-4 · RS4_CAEEL · Y43B11AR.4)40S ribosomal protein S4⌘⌘
D. rerioUniProtKB:Q642H9 · ZFIN:ZDB-GENE-040927-19 (rps4x)ribosomal protein S4, X-linked⌘
D. discoideumUniProtKB:P51405 · dictyBase:DDB_G0272825 (rps4)40S ribosomal protein S4⌘
D. melanogasterUniProtKB:P41042 · FB:FBgn0011284 (CG11276 · anon-EST:Posey270 · rpS4 · RPS4 · SX4 · RpS4)Ribosomal protein S4⌘
G. gallusENTREZ:396001 · UniProtKB:P47836 (P47836 · RS4_CHICK · RPS4 · IPI00581295)40S ribosomal protein S4⌘
H. sapiensENSEMBL:ENSG00000198034 · UniProtKB:P62701 (IPI00217030 · RS4X_HUMAN · RPS4 · CCG2 · SCAR · RPS4X · P62701)40S ribosomal protein S4, X isoform⌘
H. sapiensENSEMBL:ENSG00000129824 · UniProtKB:P22090 (RS4Y1_HUMAN · IPI00302740 · PRO2646 · P22090 · RPS4Y · RPS4Y1)40S ribosomal protein S4, Y isoform 1⌘
H. sapiensENSEMBL:ENSG00000157828 · UniProtKB:Q8TD47 (RPS4Y2 · Q8TD47 · IPI00219894 · RS4Y2_HUMAN · RPS4Y2P)40S ribosomal protein S4, Y isoform 2⌘
M. musculusNCBI:XP_897768 · MGI:MGI:3648347
M. musculusNCBI:NP_001074505 · MGI:MGI:3648888
M. musculusUniProtKB:P62702 · MGI:MGI:98158 (Rps4-1 · Rps4x · Rps4)ribosomal protein S4, X-linked⌘
R. norvegicusUniProtKB:P62703 · RGD:3600 (Rps4x)ribosomal protein S4, X-linked⌘
S. cerevisiaeUniProtKB:P05753 · SGD:S000001246 (RPS4B · YHR203C)Protein component of the small (40S) ribosomal subunit⌘
S. cerevisiaeUniProtKB:P05753 · SGD:S000003906 (YJR145C · RPS4A)Protein component of the small (40S) ribosomal subunit⌘
S. pombeUniProtKB:P87158 · GeneDB_Spombe:SPBC19F8.08 (rps4-1 · SPBC19F8.08 · rps401 · SPBC25H2.17c · rps4)40S ribosomal protein S4⌘
S. pombeUniProtKB:Q9USW5 · GeneDB_Spombe:SPBC21B10.10 (SPBC21B10.10 · rps4-2 · rps402)40S ribosomal protein S4⌘
S. pombeUniProtKB:Q9P4W9 · GeneDB_Spombe:SPAC959.07 (SPAC959.07 · rps403 · rps4 · rps4-3)40S ribosomal protein S4⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu