P-POD: Princeton Protein Orthology Database: GO3/Jaccard975

This family has 27 members: 3 Arabidopsis thaliana, 2 Caenorhabditis elegans, 3 Danio rerio, 1 Dictyostelium discoideum, 2 Drosophila melanogaster, 1 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 5 Rattus norvegicus, 3 Saccharomyces cerevisiae, 3 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

27 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_198801.1 · TAIR:locus:2178082 (MYH19.10 · AT5G39850 · MYH19_10)⌘
A. thalianaNCBI:NP_197024.1 · TAIR:locus:2150976 (F8M21_90 · F8M21.90 · AT5G15200)⌘
A. thalianaNCBI:NP_568321.1 · TAIR:locus:2143196 (F14F8_130 · F14F8.130 · AT5G15750)⌘
C. elegansWB:WBGene00004478 (F40F8.10 · rps-9) · UniProtKB:Q20228⌘
C. elegansWB:WBGene00016740 (C48B6.2) · UniProtKB:O01513⌘
D. rerioUniProtKB:Q6P5M3 · ZFIN:ZDB-GENE-010724-15 (rps9)ribosomal protein S9⌘
D. rerioENSEMBL:ENSDARG00000069287 · UniProtKB:Q7ZUH7
D. rerioUniProtKB:Q7ZUH7 · ENSEMBL:ENSDARG00000034233
D. discoideumUniProtKB:P14132 · dictyBase:DDB_G0289877 (V12 · rp1024 · rps9)ribosomal protein 1024, 40S ribosomal protein S9⌘
D. melanogasterUniProtKB:P55935 · FB:FBgn0010408 (RpL11 · RpS9 · CG3395)Ribosomal protein S9⌘
D. melanogasterFB:FBgn0034232 (CG4866 · mRpS4) · UniProtKB:Q7JZ53⌘
G. gallusNCBI:XP_001233605 · ENTREZ:771480
H. sapiensENSEMBL:ENSG00000177971 · UniProtKB:Q9NV31 (Q9NV31 · MRPS4 · C15orf12 · IMP3_HUMAN · IPI00019488 · IMP3)U3 small nucleolar ribonucleoprotein protein IMP3⌘
H. sapiensENSEMBL:ENSG00000170889 · UniProtKB:P46781 (P46781 · IPI00221088 · RS9_HUMAN · RPS9)40S ribosomal protein S9⌘
M. musculusUniProtKB:Q921Y2 · MGI:MGI:1916119 (Imp3)IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)⌘
M. musculusUniProtKB:Q6ZWN5 · MGI:MGI:1924096 (Rps9)ribosomal protein S9⌘
R. norvegicusNCBI:XP_236276 · RGD:1306825 (Imp3)IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)⌘
R. norvegicusNCBI:XP_001055997 · RGD:1594500
R. norvegicusNCBI:XP_001056883 · RGD:1566136
R. norvegicusNCBI:XP_577091 · RGD:1560159
R. norvegicusUniProtKB:P29314 · RGD:619889 (Rps9)ribosomal protein S9⌘
S. cerevisiaeUniProtKB:P32899 · SGD:S000001191 (YHR148W · IMP3)Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA⌘
S. cerevisiaeUniProtKB:O13516 · SGD:S000006002 (YPL081W · RPS9A)Protein component of the small (40S) ribosomal subunit⌘
S. cerevisiaeUniProtKB:P05755 · SGD:S000000393 (YBR189W · RPS13A · SUP46 · RPS9B)Protein component of the small (40S) ribosomal subunit⌘
S. pombeUniProtKB:O13835 · GeneDB_Spombe:SPAC19D5.05c (SPAC19D5.05c)U3 snoRNP-associated protein Imp3⌘
S. pombeUniProtKB:Q09757 · GeneDB_Spombe:SPAC24H6.07 (rps9a · rps9-1 · rps901 · SPAC24H6.07)40S ribosomal protein S9⌘
S. pombeUniProtKB:O59675 · GeneDB_Spombe:SPBC29A3.12 (rps9-2 · rps9b · SPBC29A3.12 · rps902)40S ribosomal protein S9⌘
ProteinPublicationCurator Notes
UniProtKB:P32899 · SGD:S000001191PMID:12655004 Granneman S, et al. The human Imp3 and Imp4 proteins form a ternary complex with hMpp10, which only interacts with the U3 snoRNA in 60-80S ribonucleoprotein complexes. Nucleic Acids Res. 2003 Apr 1;31(7):1877-87.The M. musculus protein Q921Y2 complements a homologous mutation in S. cerevisiae.
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
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