P-POD: Princeton Protein Orthology Database: GO3/Jaccard918

This family has 28 members: 1 Arabidopsis thaliana, 2 Caenorhabditis elegans, 4 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 5 Gallus gallus, 4 Homo sapiens, 4 Mus musculus, 4 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Jaccard918
28 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2062106 · NCBI:NP_565433.1
C. elegansWB:WBGene00000144 (apc-10 · F15H10.3) · UniProtKB:Q19487⌘
C. elegansWB:WBGene00044345 (Y48G1C.12) · UniProtKB:Q2WF61⌘
D. rerioENSEMBL:ENSDARP00000080535
D. rerioENSEMBL:ENSDARG00000061003 · UniProtKB:A2CES1
D. rerioENSEMBL:ENSDARG00000068067 · UniProtKB:A2CES2
D. rerioUniProtKB:Q08C87 · ZFIN:ZDB-GENE-031118-179 (hectd3)HECT domain containing 3⌘
D. discoideumUniProtKB:Q55ER5 · dictyBase:DDB_G0268992 (anapc10 · APC10)anaphase promoting complex subunit 10⌘
D. melanogasterFB:FBgn0034231 (CG11419) · UniProtKB:Q9V831⌘
G. gallusNCBI:XP_415744 · ENTREZ:417496
G. gallusNCBI:XP_419326 · ENTREZ:421255
G. gallusNCBI:XP_422428 · ENTREZ:424588
G. gallusNCBI:XP_422429 · ENTREZ:424589
G. gallusUniProtKB:Q5ZL04 (IPI00601403 · Q5ZL04 · RCJMB04_8g15) · ENTREZ:422461⌘
H. sapiensENSEMBL:ENSG00000164162 · UniProtKB:Q9UM13 (APC10_HUMAN · IPI00007088 · Q9UM13 · ANAPC10 · APC10)Anaphase-promoting complex subunit 10⌘
H. sapiensENSEMBL:ENSG00000044090 · UniProtKB:Q14999 (CUL7 · IPI00001690 · Q14999 · Cullin-7 · CUL7_HUMAN · KIAA0076)⌘
H. sapiensENSEMBL:ENSG00000126107 · UniProtKB:Q5T447 (Q5T447 · IPI00760744 · IPI00456642 · HECTD3 · HECD3_HUMAN · IPI00640005)Probable E3 ubiquitin-protein ligase HECTD3⌘
H. sapiensENSEMBL:ENSG00000074755 · UniProtKB:O43149 (IPI00443759 · IPI00385631 · IPI00847913 · O43149 · ZZEF1 · IPI00790964 · ZZEF1_HUMAN · KIAA0399)Zinc finger ZZ-type and EF-hand domain-containing protein 1⌘
M. musculusUniProtKB:Q8K2H6 · MGI:MGI:1916249 (Apc10 · Anapc10)anaphase promoting complex subunit 10⌘
M. musculusUniProtKB:Q8VE73 · MGI:MGI:1913765 (p185 · Cul7 · p193)cullin 7⌘
M. musculusUniProtKB:Q3U487 · MGI:MGI:1923858 (Hectd3)HECT domain containing 3⌘
M. musculusUniProtKB:Q5SSH7 · MGI:MGI:2444286 (Zzef1)zinc finger, ZZ-type with EF hand domain 1⌘
R. norvegicusNCBI:XP_001067111 · RGD:1309823
R. norvegicusNCBI:XP_001056520 · RGD:1587048 (LOC680835)similar to cullin 7⌘
R. norvegicusNCBI:XP_001070328 · RGD:1308936 (Anapc10)anaphase promoting complex subunit 10⌘
R. norvegicusNCBI:XP_001080236 · RGD:1311189
S. cerevisiaeUniProtKB:P53068 · SGD:S000003209 (YGL240W · DOC1 · APC10)Processivity factor required for the ubiquitination activity of the anaphase promoting complex (APC), mediates the activity of the APC by contributing to substrate recognition⌘
S. pombeUniProtKB:O42971 · GeneDB_Spombe:SPBC1A4.01 (SPBC1E8.06 · apc10 · SPBC1A4.01)anaphase-promoting complex subunit Apc10⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
OMIM (1)
ENSEMBL:ENSG00000044090 · UniProtKB:Q14999#273750 THREE M SYNDROME;;3@M SYNDROME;;GLOOMY FACE SYNDROME;;LE MERRER SYNDROME;;DOLICHOSPONDYLIC DYSPLASIAYAKUT SHORT STATURE SYNDROME, INCLUDED
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu